Cebus imitator (Panamanian white-faced capuchin): 108282863
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Entry
108282863 CDS
T08783
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108282863 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108282863 (PATL1)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108282863 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
108282863 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
108282863
NCBI-ProteinID:
XP_017354375
Ensembl:
ENSCCAG00000023759
UniProt:
A0A2K5Q7V9
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFTQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTITSLLQQLM
NLPQSAATPAPSNPHLTAVLQNKFGLSLLLVLLSRGEDLQSSDPATEPTRNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDQQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctagatgaagatgaagatgcatttcag
ggacttggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagaaaagcta
ccagtggcagttaatgaacaaacaggcaatggagagagagatgaaatggatttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtgcagaccaggccagttttacaaccccaaccaggaagt
ctgaattctagtatctgggatggatctgaagttctgaggcgaatccgaggaccgctgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccccag
ggtccagaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcacccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccgcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
cttcagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgagtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccctctgctacaccacctccacagcagcaccctcctggtccaggacctcacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcaccttcatccacag
caccgtcgactcttgcatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagatagaggaagtcaccggagcagtcatcaggatcatctccgaaaggatcca
tatgccaatctcatgttgcagagggaaaaggattgggtctctaaaatccagatgatgcaa
ctgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaaatacaaggtgatggccctaaaaaggagcgcaccaag
cttatcacccctcaggtggccaaactagagcacgcctataagccagtacaatttgagggc
tctttgggaaagcttactgtttctagtgtgaataatccccgaaaaatgattgatgctgtt
gtgacatctcggagtgaggatgatgagacaaaagaaaaacaagttcgagacaagaggaga
aaaacccttgtcataattgagaaaacctacagtttactccttgatgtagaggactatgaa
agacgttatctcctaagtctagaagaagagcgacctgccctaatggatgagagaaagcac
aaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagaaaggcctagc
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctc
cctttccttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctaccatcttccatcagtgactatcaccagccttttgcaacagctaatg
aacctacctcaaagtgcagctacaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctccttgtcctcctgagccgcggggaagacctacag
agttcagaccctgctacagaaccaacacgaaataatcagtggacggaggtgatgtttatg
gcaacacgagaacttctacggattccccaagcagccctggccaagccaatctctatacct
acaaacctagtgtccctcttttctcgctatgttgaccagcagaaactgaacttgctggag
acaaaactgcagctagttcaggggatacgatag
DBGET
integrated database retrieval system
