Cebus imitator (Panamanian white-faced capuchin): 108283669
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Entry
108283669 CDS
T08783
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108283669 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108283669 (XAB2)
03041 Spliceosome [BR:
cimi03041
]
108283669 (XAB2)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108283669 (XAB2)
Spliceosome [BR:
cimi03041
]
Complex B
Other components
Prp19-related factors
108283669 (XAB2)
Complex C
108283669 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
108283669
NCBI-ProteinID:
XP_017355641
Ensembl:
ENSCCAG00000022706
UniProt:
A0A2K5Q240
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGSPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcccggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaagaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacattgagttcaaacagggctccccgaagcccaggctcaatcagctgtacgagcgggca
ctcaagctcctgccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctatgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctg
atggaccaggggcgtgtcacacacacccgccgcaccttcgaccgtgccctccgggcgctg
cccatcacacagcactctcgaatttggcccttgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgtggctaccggcgcttcctcaagctgagtcccgagagtgcc
gaggagtacatcgaatacctcaagtcaagtgaccggctggatgaagccgcacagcgcctg
gccacagtggtgaacgatgagcgtttcgtgtccaaggctggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtccagtccctcaacgtg
gacgccatcatccgtgggggcctcacccgcttcactgaccaactgggcaagctctggtgt
tcactcgccgactactacatccgcagcggccactttgagaaggctcgggacgtgtacgag
gaggccatccggacagtgatgaccgtgcgggacttcacacaggtgtttgacagctacgcc
caattcgaggagagcatgatcgccgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggacgatgtggacctggagctgcgcctagcccgcttcgagcagctcatcagccgg
cggcccctgctcctcaacagcgtcctgctgcgccagaacccacaccatgtgcacgagtgg
cataagcgtgtcgccctgcaccagggccgtccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggca
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagctggagctccggcacgagaactatgacgaggccctgcggctgctgcggaaggccaca
gcgctgcctgcccgccgggccgagtacttcgacggctcagagcccgtgcaaaaccgcgtg
tacaagtcactgaaggtgtggtccatgcttgccgacctggaggagagccttggcaccttc
cagtccaccaaggccgtgtacgaccgcatcctggacctgcgcatcgcgacaccccagatc
gtcatcaactatgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtcggacatctggagcacctac
ctgaccaaattcatcgcccgctacgggggccgcaagctggagcgggcgcgggacctgttc
gaacaggcgctggacggctgcccgccaaaatacgccaagaccttgtacctgctgtatgcg
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgcgccacc
agggccgtggagcctgcgcagcagtacgacatgttcaacatctacatcaagcgggcggct
gagatctacggggtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtca
gatgagcatgcacgtgagatgtgcctgcggttcgcagacatggagtgcaagctgggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgcgacccccggacgacc
ggggcgttctggcagacgtggaaggactttgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgcatccggcggagcgtgcaggccacatacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtctcaggcagcgccacgggcaccgtgtccgacctggcc
cctgggcagagcggcatggatgacatgaagctgttggaacagcgcgccgaacagctggcc
gccgaggcggagcgagaccagcccctgcgtgcccagagcaagatcctgttcgtgaggagc
gacgcctccagggaggagctggcagagctggcacagcaggtcaaccccgaggagatccag
ctgggtgaggatgaggacgaggacgagatggacctggagcccaacgaggtccggctagag
cagcagagcgtgccagctgccgtgttcgggagcctgaaagaagactga
DBGET
integrated database retrieval system
