KEGG   Cebus imitator (Panamanian white-faced capuchin): 108284548
Entry
108284548         CDS       T08783                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03018  RNA degradation
cimi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108284548 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108284548 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cimi03019]
    108284548 (LSM4)
   03041 Spliceosome [BR:cimi03041]
    108284548 (LSM4)
Messenger RNA biogenesis [BR:cimi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108284548 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108284548 (LSM4)
Spliceosome [BR:cimi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108284548 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 108284548
NCBI-ProteinID: XP_017356779
Ensembl: ENSCCAG00000036308
UniProt: A0A2K5S8U8
LinkDB
Position
Unknown
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgctgaagacagctcagaatcaccccatgttggtggagctgaaa
aatggggagacatacaacgggcacctggtgagctgcgacaactggatgaacattaacctg
cgagaggtcatctgcacgtccagggacggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgatgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaag
ggccgcggcatgggcggtgccggccgaggtgtgtttggtggccggggccgaggtgggatc
ccaggcacaggcagaggccagccggagaagaagccgggcagacaggcgggcaaacagtga

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