Cebus imitator (Panamanian white-faced capuchin): 108285198
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Entry
108285198 CDS
T08783
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cimi03000
]
108285198 (SOX1)
Transcription factors [BR:
cimi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108285198 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108285198
NCBI-ProteinID:
XP_017357713
Ensembl:
ENSCCAG00000020070
UniProt:
A0A2K5PMN3
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGTKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagactgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggcggaggcgggggcggcggcggc
ggcgggggcaccaaggccaaccaggaccgggtcaagcgacccatgaacgccttcatggtg
tggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaaacgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcggccgttc
atcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtac
cggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcggg
ctcctggcggctggcgcgggcggcggcggcgcggccgtggccatgggagtgggtgtgggc
gtgggcgcggcagccgtgggccagcgcctggagagcccgggcggtgcggcgggcggcggc
tacgcgcacgtcaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcg
gcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggc
ggcgcgcacccgcacgcgcaccccgcgcacccgcatccgcaccacccgcacgcgcacccg
cacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctcc
aactcgcagggctacatgagcgcatcgccctcgggctacggcggcctcccctacggcgcc
gcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggcagtggcggcggcg
gcggcggcggcggccgcgtcgtcgggcgccctgggcgcactgggctcgctggtcaagtcg
gagccgagcggcagcccgcctgcccctgcgcactcgcgggcgccgtgccccggggacctg
cgcgagatgatcagcatgtacttgcccgcgggagaggggggcgacccggcggcggcagcc
gcgcagagccggctgcattcgctcccgcagcactaccagggcgcgggcgcgggcgtcaac
ggcacggtgcccctgacgcacatctag
DBGET
integrated database retrieval system
