Cebus imitator (Panamanian white-faced capuchin): 108285362
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Entry
108285362 CDS
T08783
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
cimi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108285362 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108285362 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108285362 (SYMPK)
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108285362 (SYMPK)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108285362 (SYMPK)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108285362 (SYMPK)
U7-dependent histone pre-mRNA processing factors
108285362 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
108285362
NCBI-ProteinID:
XP_017357988
Ensembl:
ENSCCAG00000036309
UniProt:
A0A2K5S926
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MASSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEATGKQEPEAKEASAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSPSARPGPPTSEEAMDFREEGPECETPAI
FISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTLKEERSPQTLAAIGEDAVKTPSPAAE
DVGEPEAKGNS
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcagcagtggggacagcgtcacccgccggagcgtggcatcacagttttttact
caagaggaggggccgggcattgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcagcgctgattaccaatgactcaaagatcacagtgcttaaacaggtccaggaa
ctgatcatcaacaaagaccccacactactggataactttctggacgagatcatcgcattc
caagcagacaagtcaattgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgt
aagcgagacattgagttactgctgaaactcattgcaaacctcaacatgctcttgagggac
gagaatgtgaatgtggtaaagaaggccatccttaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctacaggaggcctgctgggacatg
gtatctgccatggcgggggacatcatcctactgttggactctgacaatgatggcatccgc
acccacgccatcaaatttgtggagggcctcattgtcaccctgtcaccccgcatggccgac
tcagagataccccgacgccaggagcatgatatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaatgtgctgtgggaagaggggaaggcagctttggagcagctgctt
aagttcatggtgcaccctgccatctcctccatcaacctgaccacagctctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaagtgatccaggcctatgaaact
ctacatgccaacctgcccccgacgctggccaaatcgcaggtgagcagtgtgcgtaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggcccag
atcaccactctgctagtggacctgggcacaccccaggccgagatcgcccgcaatatgccc
agcagcaaggatacccgcaagcggccccgagacgactcggactccacgctcaagaagatg
aagctggagcccaacctgggggaggacgatgaggacaaggacttggagccaggcccatcc
gggacctcaaaggcctcagcccagatctccggccagtcagacacagacatcacagctgag
ttcctgcagccactgctaacgcctgataatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgccggcctccttccaggccatctacacccctgtggagtcagca
ggcacagaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggtctgggaccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagccagagagcgtcctgatcaagcggcgcctttcagcccagggccaagccatc
tcagtggtaggctccctgagctccatgtcccctctggaggaggaggcgccccaggccaag
aggaggccagagcccattatccctgtcactcagccccggctggcaggtgctggtgggcgc
aagaagatctttcgtctcagcgacgtgctgaagcccctgaccgatgcccaggtggaggcc
atgaagctgggcgctgtaaagaggatcctgcgggctgagaaggctgtggcctgcagcggg
gcagcccaggtgcgcataaagatcctggccagcctggtgacacagttcaactcgggcctc
aaggcggaggtcctgtccttcatcttggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctacctggctgcaggtgcctcaggctccctggac
aagtatgaggactgcctcatccgcctgctgtccggcctgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgctggaggcaccgctcatcacagagagtgccctggag
gtgatccgcaagtactgcgaggatgagagtcgcacctatctgggcatgtccacgcttcga
gacctgatcttcaagcgtccatcccgccagttccagtacctgcatgtcctcctcgacctc
agctcccatgagaaggacaaggtgcgctcccaggccctgctgttcatcaaacgcatgtat
gagaaggaacagctgcgggagtatgtggagaaatttgccctcaactacctgcaactcctg
gtgcaccccaacccaccatctgtgctgtttggagctgacaaggacacagaggtggcagcg
ccctggacggaggagacagtgaagcagtgtctctacctctacctggccctcctgcctcag
aaccacaagctgatccacgagctggcggccgtgtacactgaagccatcgctgacatcaag
cggacagtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactccccggag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtgacgcggtgtctg
cacagcctcacagacaaagtgccaccctccccggagctagtgaagcgggtccgggatctc
taccacaagcgactgccagacgtccgcttcctcatcccggtgcttaatgggctggagaag
aaagaggtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcatggtgagggaaactcggccttatccccgctg
aaccctggagagctcctgatcgcattacacaacatcgactccgtgaagtgtgacatgaaa
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccttgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagccgtctttgacaagtgtcccgagctccgggagcccctgctggctcacgtccga
tccttcaccccccaccagcaagctcacatcccgaactccatcatgaccatcttggaggca
accggcaagcaggagccagaggccaaggaggcatctgcggggcccttggaggaggatgac
ctggagcccctggccctggcccctgccccggccccccggcccccacaggacctcatcggc
ctgcggttggcccaggagaaggccttaaagcggcagctggaggaggagcagaagctgaag
cccggaggagtgggagccccctcctcttcctcctctccctcagcccggccgggcccgccc
acgtcggaggaagccatggatttccgggaggaggggcctgagtgtgagaccccggccatc
ttcatcagcatggatgatgactcggggctgactgaggccgcactgttggactctagtctg
gaggggcccctacccaaggagactgcagcgggcgggttgaccttgaaggaggagcggagc
ccccagaccctcgccgctattggagaagatgctgtgaagacccccagcccggccgctgag
gatgtgggggaacctgaggccaaggggaacagctga
DBGET
integrated database retrieval system
