KEGG   Cebus imitator (Panamanian white-faced capuchin): 108285540
Entry
108285540         CDS       T08783                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108285540 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cimi03019]
    108285540 (EXOSC1)
Messenger RNA biogenesis [BR:cimi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     108285540 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     108285540 (EXOSC1)
SSDB
Motif
Pfam: ECR1_N
Other DBs
NCBI-GeneID: 108285540
NCBI-ProteinID: XP_037585258
Ensembl: ENSCCAG00000023986
LinkDB
Position
Unknown
AA seq 166 aa
MRSRLRFHPGFGTATIMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLMKS
CENGAVKEAACHLLSLFSLRLSLSSTRKMSEQLKKTRLLEAWRHFSFIHSIKEESRANLW
GLGSATSFSLPGVQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcgaagtagacttcgtttccatccgggttttgggacagcgacaatcatggcgccaccc
gtcagatactgcattcccggcgaacgtctgtgtaacttggaggagggcagcccgggcagt
ggcacctacacccgccacggttacatcttttcgtcgcttgccggctgtctgatgaagagc
tgcgagaacggcgcggtaaaggaagcggcttgccatctcctctctctgttttctcttagg
ctttcattaagttccacaaggaagatgtccgagcaactgaaaaagacaaggttgttggaa
gcttggaggcacttcagtttcatacacagcataaaagaggagtctcgggcaaatctctgg
ggcctgggctctgctaccagcttttcccttccaggtgtccagatggttcccatcagttgg
tgtgagatgcagtgccctaagacccacactaaagagttccggaaagtggcccgcgtacag
cctgaattcttgcagacctaa

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