Cebus imitator (Panamanian white-faced capuchin): 108286198
Help
Entry
108286198 CDS
T08783
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03008
Ribosome biogenesis in eukaryotes
cimi03013
Nucleocytoplasmic transport
cimi03015
mRNA surveillance pathway
cimi05014
Amyotrophic lateral sclerosis
cimi05164
Influenza A
cimi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108286198 (NXF1)
03015 mRNA surveillance pathway
108286198 (NXF1)
03008 Ribosome biogenesis in eukaryotes
108286198 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108286198 (NXF1)
05168 Herpes simplex virus 1 infection
108286198 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108286198 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108286198 (NXF1)
03009 Ribosome biogenesis [BR:
cimi03009
]
108286198 (NXF1)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108286198 (NXF1)
mRNA cycle factors
Stress granule specific factors
108286198 (NXF1)
Ribosome biogenesis [BR:
cimi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108286198 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
108286198
NCBI-ProteinID:
XP_017359302
Ensembl:
ENSCCAG00000030567
UniProt:
A0A2K5RBW1
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MADEGKSYSEHDDERVNFPQRRKKGRGPFRWKYGEGNRRSGRGGSSIRSSRLEEDDGDVA
MSDAQDGPRVRYNPYTTRPNRRGDTWHDRDRIHVTVRRDRAPSERGGAGTSQDGTSKNWF
KITIPYGKKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAINYKIL
DRENRRISIIINSSAPPPTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVA
QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG
NELKSERELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPI
AFDIEPPTTLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSI
PFIPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFV
VDISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPATNSGLCIVNDELFVRNAS
SEEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSA
QAFTHLKAKGEIPEVAFMK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcgtacagcgagcacgatgatgaacgtgttaatttccctcaa
agaaggaagaaaggccggggtcccttccggtggaaatatggtgaaggaaaccgtaggtct
ggaagaggtggttctagtattcggtcttcccgccttgaagaagatgatggagatgtggca
atgagtgatgcccaagatggtccacgagtaagatacaacccctataccacccggcctaac
cgtcggggtgatacgtggcatgatcgagatcgcattcatgttaccgtgcggagagacaga
gctccttcagagagaggaggagctggcaccagccaggatgggacctcaaagaactggttc
aaaattacaattccttatggcaaaaagtatgacaaagcatggctcctgagcatgattcag
agcaagtgcagtgtgcccttcacccctattgagtttcactatgagaatacacgggcccag
ttctttgttgaggacgccagtactgcctctgcattgaaagctatcaactataagattttg
gatcgggagaaccgaaggatatctatcatcatcaactcctctgctccgccccccactata
ctgaatgaactgaagccagaacaagtagaacagctaaagctgatcatgagcaaacgatat
gatggctcccaacaagcccttgacctcaagggccttcgttcagacccagatttggtggcc
cagaacattgatgttgtcctgaaccgcagaagctgtatggcagctaccctgagaatcatt
gaagagaacatccctgagctgttgtccttgaacttgagcaacaacaggctatacaggctg
gatgacatgtctagcattgtgcagaaggcacccaacctgaagatcctaaacctttctgga
aatgaattgaagtctgagcgggagttggacaagataaaggggctgaagctagaagagctg
tggctcgacggaaactccctgtgtgacaccttccgagaccagtccacctacatcagcgcc
attcgtgaacgatttcccaagttattacgcctggatggccatgagctacccccaccaatt
gcctttgatattgaaccccccacgacgttaccgccctgtaagggaagctattttggaaca
gaaaacttgaagagtctggtcctgcacttcctacagcagtactatgctatttatgactct
ggagaccggcaagggctcctagatgcctaccatgatggggcctgttgttccctgagcatt
cctttcattcctcaaaaccctgcccgaagcaacttggctgagtatttcaaggatagcaga
aatgtgaagaagcttaaagaccctaccttgcggttccggctattgaagcacacgcgtctc
aacgttgttgccttcctcaacgaattgcccaaaacccagcacgacgtcaattcctttgtg
gtagacataagcgcccagactagcacactgctgtgtttttctgtcaatggggtcttcaag
gaagtggatggaaagtcccgagattctttgcgagccttcacccggacattcattgctgtt
cctgctaccaattcagggctgtgtattgtaaacgacgagctatttgtgcggaatgcaagt
tctgaagagatccaaagagccttcgctatgcctgcacccacgccttcctccagcccagta
cccaccctctctccagagcagcaagaaatgttgcaggcattctctacccagtctggcatg
aacctcgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcc
caggccttcactcatctcaaggccaagggcgagatcccagaagtggcattcatgaagtga
DBGET
integrated database retrieval system
