Cebus imitator (Panamanian white-faced capuchin): 108286570
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Entry
108286570 CDS
T08783
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108286570 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cimi04121
]
108286570 (SLX4)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108286570 (SLX4)
Ubiquitin system [BR:
cimi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108286570 (SLX4)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108286570 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108286570
NCBI-ProteinID:
XP_017359969
Ensembl:
ENSCCAG00000024569
UniProt:
A0A2K5QC72
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MKLTVNETELGLGSLSHPTTCPWIDPHSSEDQPESLKTGQMMDESDEDFKELCASFFQRV
KKRGTKEVSGERKAQKAASNGTQIRSKFKRTKQTATKSKTLQRPAEKKSPSGSQASRAKK
QVVTKCQASEPALTVNGEGGVLASAPDQPVLWETAQNTQTGNWQESLPDLSREETRENVP
DSDSQPPPSCLTAAVPSPSKPRTAKLVLQRMQQFKRADPERLRHTSEECSLQAAPEENVP
KSPQEEMMAENGDGPGLPAPGSDAVVALALQQEFARVRASAHDDSLEEKGLFFCQICQKN
LSAMNVTRREQHVNRCLDEDEKALRPSAPQIPECPICGKQFLTLKSRTSHLKQCAVKMEV
GPQLLLQAVRLQTAQPEGSGSPSVSSFSNHGGGLKRRGPISKKEPRKRRKIDETPSEDLL
MAMALSRSEMEPCAAVPALRLESAFSERIRPEAEKKSRKKKPPGSPPLLLVQDSETTGRQ
IEDRVDLLLSEEVELSSTPPLPTSRILKKWREKAGWCLPPPEGKQSFLWEGSALTGAWAV
EAFYTASLVPPIVPQRPAQGLTQEAVLPLVPPEQSEPGTRRSPALHSTPPAGCDSRELSP
SASQREHQALQDLMDLAREGFSASQWPGSGGLAGSEGATGLDMVPSSLPLTGFVVPSQDK
QLDRGGCASLSLGLLVSDFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVN
NEGFSAVEDGVLTQRVLLGDVSTEAARTFLHYLYTADTDLPPGLSSELSSLAHRFGVSEL
VQLCEQVPAATDSEGKPWEEKEAENCQSRAENFQELLRSMWADEEEEVETLLKSKGHEED
QEKVNEEEMEEIYEFAATQRKLLQEVGASGTGEDTDWLVGDSPGSGQLLASVQMQEQQDK
VEEVEPSGLGNEAATTWKKVGQSTHSLPQGQCSGTLGLEAPEQEAPNEALGHSSCSSPSG
GCQAERKESSLPRSDDARDYEQLFSSTQGAFSEPSQITSEPEEQGGTVRERGLEVSHRLA
PWQASPPHPCCFLLGPPQGGSPCQSHHPHRTSGSALSTPRSRSRTSQVGSPTSLSPAVPS
KQKRERSVLTLSNEPGQKGKECLSMLECRDKGVVMSPEKSLSIDLTQSNSSPRSQKSSSK
LNKDDEVILLLDSDEELELEKSKKKSVFSDPLEEKKALEISPRSCELFSIIDVDADQEPS
QSPPGREASLQQEDKAELPENRGSWGSTGAPWLSCDRESSPKEGSTTDTSWLVPATPLAG
RSRDCSSQTQISSLRSGPAVEAVTQHMPRPSVGNREGNEAAQKLSVIRPQTPSSCCTPVS
PGTSDGRRQGHRSPSCPYPEGHLHSSPLAPCPISGGHTHFSRRFLKHSPPGPSFLNQTTV
TEVVELGDSDDEQEVASHQANSSPPLHSDPPVPIDNGCWHMEPLSPIPIDHWNLERTGPL
STSSPSLRLKEAADSCDCCSPGLLDTTPIRGSCTAHRKSQEKSSGVGSLGNSRLNALNSA
LWDDWDWEEQRPPETPPPTQTLSTSGAQKPKVLETPKGANRKKNLPPKVPITPMPQYSIM
ETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSDSEDESQSSQVLLQAPHCQTL
ASQTCKPSRAAVHAQQVATTGPEAHRPKGPAKTKGPRHQKKHPESITPLSRSPVKEAPPG
LDDDAQLPASQESVATSVDGSDSSLSSQSSSSCEFGAAFVSAGEEEEGEDEVSASQAAVH
VADTDEALRCYIRSKPALYQKVLLYQPFELGELKAELKQNGLHVSSGRLLDFLDTHCITF
TTAAARREKLQGRRRQPRGKKKAEHN
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgactgtgaatgagactgagctaggcttaggttcactttctcatccgactaca
tgtccctggattgaccctcactcctctgaagaccagcctgaaagccttaaaactggtcag
atgatggatgagtctgatgaggatttcaaagaactctgtgctagctttttccaaagggtc
aaaaaacgtggaaccaaggaagtgtcaggagaaaggaaggcacaaaaggccgcctcaaat
ggcactcagataagaagcaaatttaaaaggaccaaacaaactgctaccaagagcaaaacc
cttcagcgccctgcagagaagaaatctccatctggcagccaggcctctagggctaaaaag
caagtggtaaccaaatgccaagcaagtgaaccggccctcactgtgaatggagagggaggt
gtgcttgcctctgctccagatcagcctgtgctctgggaaacagcacaaaacacccagacg
ggtaactggcaagaatcactgccagacctttccagggaggaaacccgagagaatgtgccc
gacagcgactcccagcctcctccttcctgtttgacagcagcagtgccaagtccctccaaa
ccccgcacagcaaaattggtcctacagcgaatgcagcagttcaagagagcagaccctgaa
cgtttgagacacacttcagaagagtgctccctccaggctgcgccagaagaaaatgtccca
aagagtcctcaagaggagatgatggcggagaatggggatgggcctgggctccctgcccca
gggagcgacgctgtggtggccttggccctgcagcaggagtttgcacgggtcagagcatcg
gcacatgatgacagcctggaggaaaagggattgttcttctgccagatctgtcaaaagaac
ctctcagccatgaatgtgacacgaagggagcaacatgtgaacaggtgcttggatgaagat
gaaaaggcactaagaccttctgcgcctcagatccctgagtgcccaatttgtgggaaacag
tttctcaccttaaagagcagaaccagtcacttgaagcagtgtgccgtgaagatggaggtg
ggcccccagctcctgctgcaggctgtgcggctgcagacagcacagcctgaggggagcggc
agcccatcggtgtccagcttcagcaatcatggtggaggtctgaaacggagaggacccatc
agcaagaaggagccacggaagaggcggaagatagatgagacaccatctgaggacctgctg
atggccatggctctgtcccggtcagagatggagccatgtgcagctgtgccagctctcagg
ctggaaagtgccttttctgagaggataagaccagaagcagagaagaagagtcgcaagaag
aaacccccaggttcacctccactgttgttagtccaggattccgagaccacaggccgacag
atagaggaccgtgtggacttactcctctctgaggaagtggaattgtccagcacgccacca
cttcccaccagcaggattttaaagaaatggcgggaaaaggcaggatggtgtctccctcca
cctgaaggcaagcagagctttctgtgggagggcagcgcactgaccggggcctgggctgtg
gaggccttctacacagccagcctggtccctcccatcgtgccccagcggcctgcccagggc
ctcacgcaggaagccgtgctgccactggtgccacctgagcagtcagagccgggcacgcga
aggtcacctgctctccatagcaccccgcctgcaggctgtgactccagggagctgtcacct
tcggccagccagagggagcatcaggccctgcaggacctcatggacctggcaagggagggg
ttcagtgccagccagtggcccggcagtgggggcctggctggctcagaaggggccacaggg
ttggacatggtgcccagcagccttcctctgactgggtttgtggtgccatcacaggacaag
cagctggacaggggcggctgtgcctcgctctcccttgggctgctggtttctgactttggc
gccatggtcaataacccacacctgagtgacgtccagttccagacagacagcggggaggtg
ctttacgcccacaagttcgtgctttatgcccgatgcccgctcctcatccagtatgtgaac
aacgaaggcttctctgctgtagaggatggagttctgacccagcgtgtcctgctgggtgac
gtgagcactgaggccgcccgcacattcctgcactatctctacactgcggacactgacctt
cctcctggcctgagctcagagctgagctccctggcacacaggtttggcgtgagcgagctt
gttcagctgtgtgaacaggtgcccgctgccacagattcggagggcaaaccatgggaggag
aaggaagccgagaattgccaaagcagggcggagaatttccaggaactcttgaggtcaatg
tgggcagatgaagaggaggaagtggagactttgttgaaatctaagggccatgaagaagat
caagaaaaagtgaatgaagaagaaatggaagaaatttatgaatttgcagctactcagcga
aagctgctccaggaagtaggagcatcgggtactggcgaggacactgactggctggtgggg
gacagtccgggctctgggcagctccttgcaagtgtccagatgcaggaacagcaggacaag
gtagaggaggtggagccatcggggctgggaaatgaggccgccaccacctggaagaaggtg
ggacagtccacccactcactgccccagggccagtgctcagggacactgggactggaggcc
cctgagcaggaggcgccgaatgaggcgcttggccattccagctgctccagcccttccggg
ggctgccaggcagagagaaaagaaagctcccttccacgttcagatgatgccagggattac
gaacagctcttctcttcaactcagggagcgttctcagagccgtcacaaataaccagtgag
cccgaggaacagggtggcactgtcagggaaagggggctggaggtttctcatcgcctggct
ccctggcaggcgtctccaccgcacccgtgctgcttcctactcgggcctccccagggcggg
agtccctgccagtctcaccaccctcatcgtacaagcgggtcagccctgtcgactccccgg
tcccgcagcagaacatcccaggtggggtccccaacctcgctgtctccagctgtgccatca
aagcagaaaagggagaggagtgtcctcacgctgtctaacgagccaggccagaaaggcaaa
gagtgtctgtccatgctggagtgcagagataagggagtcgtgatgtccccagaaaaatct
ctgtcaattgacctaacccagtcaaattcaagtcccagatctcagaaatcttcatccaaa
ctgaacaaagatgatgaggtcatcctcttactggactcagatgaagagctggagctggaa
aaatccaaaaagaagtccgtttttagtgatcccctggaagaaaagaaagctctagaaatt
agccctagatcctgtgagctgttctccatcattgacgttgatgcggatcaggaaccttcc
cagagcccaccgggaagggaagcctcactgcagcaggaggacaaggcagagctgccagag
aatcggggctcttggggcagcacaggggctccctggctgtcctgtgaccgtgagagcagc
cccaaagagggcagcaccacagacacctcatggctggtgcccgccaccccgctggcaggc
agaagccgagactgttcttcccagacccaaatcagcagcctcaggagtgggccggccgtg
gaggcggtgactcagcacatgcccaggccctcagtaggaaacagggaagggaacgaagcc
gctcagaagctttcggtcatcaggccccagacaccgtcctcatgctgcactcctgtctct
ccaggaacttccgacggcagaaggcaaggccacagaagtccttcctgcccctaccccgag
ggccacctgcactcctctccgctggctccatgtcccatctcagggggccacacccacttc
agcaggcggttcttgaaacactcgccacctgggccaagctttctgaatcagactacagtg
actgaagtcgtggaactcggggacagtgacgatgagcaggaggtggcctcccatcaggcc
aacagcagccccccactgcacagtgaccccccagttccaattgacaatggctgctggcac
atggagcccctctcgccaattcccattgaccactggaacctggagcggaccggccccctg
agcaccagcagccccagcctcaggttgaaggaggccgcggacagctgtgactgctgctcc
ccgggactcctggataccactcccatccgaggaagctgcactgcccatcggaaatcgcaa
gagaagtcctcgggtgtgggctccctggggaacagcaggctgaatgctctgaattcggct
ctgtgggatgattgggactgggaagagcagaggcctccagagacccctcctcccacccag
acgctaagcaccagtggagctcagaagcctaaagtgttagagacgcccaaaggtgctaat
cggaagaagaatttgccccccaaagtgcccatcactccaatgccacagtattccattatg
gagaccccggtgctgaagaaggaactggataggtttggagtccgccctctgcctaaacgc
cagatggttctgaagctgaaggagatattccagtacacgcaccagaccctggactcagac
tccgaggacgagagccagtcctcacaggtgctgctgcaggcacctcactgccagaccctc
gcctcccagacctgcaagccttcaagggcagcagtccatgcacagcaggtggccaccaca
ggacctgaggcccataggcccaagggacctgctaagaccaagggcccccgacatcaaaag
aagcatcctgaaagcatcacacccctgagcaggtcacccgtcaaagaggcacctccaggc
cttgacgatgacgcccagctcccagcctcccaggaatctgtggccacctctgtggatggc
agtgacagctcgttgagctcacagagttcttcctcctgtgagtttggagcggcatttgtg
tctgcaggtgaagaggaggagggcgaggacgaggtcagtgcctcgcaggcagccgtgcat
gtggcagacacggacgaggcactgagatgctacatccgctccaagccggccttgtaccag
aaggtgctgctgtaccagccctttgagctgggggagctgaaggccgagctgaagcagaat
ggcctccatgtgtcctcgggcaggctgttggacttcctggacacccactgtatcaccttc
accactgccgccgcccgcagggagaagctccaaggcaggaggcggcagcctcggggcaag
aagaaggcagagcacaactga
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integrated database retrieval system
