Cebus imitator (Panamanian white-faced capuchin): 108287351
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Entry
108287351 CDS
T08783
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108287351 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cimi03032
]
108287351 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108287351 (TOPBP1)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
108287351 (TOPBP1)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
108287351 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
108287351
NCBI-ProteinID:
XP_017361199
Ensembl:
ENSCCAG00000033242
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MSAPLQSPVQRLPTSGEGAAPQSLSSFGARWSLHFTTQRQIRRGCQSIKEFQSEEYLQII
TEEEALKIKENDRSLYICDPFSGIVFNHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVY
NMVMSDITISCTSLEKEKREEVHRYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANL
KKPILLPSWIKTLWEKSQEKKITRYTDINMEDFRCPIFLGCIICVTGLSGLDRKEVQQLT
VKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESMY
KTEPRPEAKTMPNSSTPTGQMNTIDSRTLSDVSNISNINASCISESICNSLNSKLEATLE
NLENLDVSVFQAPEDLLDGCRIFLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVG
DYDDELKQFWNKSAHRPHVVGAKWLLECFSKGYILSEEPYIHANYQPVEIPVSDPPESKA
AVLIKKNSSFSKKDFTPSEKHEQADEDLLSQYENDSSTVVEGKKSEAEKSEVRPFNDSTH
VEPLNDSTHILQEENQSSVSHCFPDDSTVTEEGLFSQKSFLVLGFSTENETNIANIIKEN
AGKIMSLPSRTIADYAVVPLLGCKVEATVGEVVTNTWLVTCIDYQTLFDPESNPLFTPVP
VMTGMTPLEDCVISFSQCAGAEKESLTFLANLLGASVQEYFVRKSNAKKGMLASTHLILK
ESVGSKYEAAKKWNLPAVTVAWLLETARTGKRADESHFLIENSSKEERTLEMEITNGINL
NPDTAEHPGTHLQTHRKTVVTPLDMNHFQSKAFCAVVSQHARQVSASPAVGQPLQKEPSL
HLDTPSKFLSKDKLFKPSFDVKDALAALQTPGRPSQQKRKLSTPLSEVIVRNLKLALANS
SRDAVALSASPQLKDAQSKKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSF
DETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWLLDCAQENKHLPESLYPHTYNPKMS
LDISAVQDGRLCNSRLLSAVSATKNDEPDHLILEENDVDNMATNNKESAPSNENGRNDSK
GVLTQTLEMRENFQKQLQEIMSATSIVKHQGQRTSLSRSGCNSASSTPDSTRSARSGRSR
VLEALRQSRQTIPDVNTEPSQNEQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIQ
NLEDPPFQKPLPDSEIAKQAICDPGNIRVTEAPKHLITEELETPIKDSHLIPTPQAPSIA
FPLANPPVAPHPREKIITIEDTHEELKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQ
CFDPSCTHIVVGHPLRNEKYLGSVAAGKWVLHRCYLEACRTAGHFVQEEDYEWGSSSILD
VLTGINVQQRRLALAAMRWRKKIQQRQESGIVEGAFSGWKVILHVDQSREAGFKRLLQSG
GAKVLPGHSVSLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYIADYLMQESP
PHVENYCLPEAISFLQNNKELGPGLSQKRKASTEKNKIKRPRVH
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccctctccagtcccctgtccagcgcctgcccacctcgggcgagggggccgca
ccgcagagcctgagcagcttcggagcgcgctggtctttacactttacaacccagagacag
atccgccgggggtgccagtcaataaaagaattccaatcagaagaatatcttcaaattatt
acagaagaagaggcattgaaaataaaggagaatgatagatcactttatatctgtgaccct
tttagtggcattgtctttaatcacctcaaaaagcttggctgcagaattgttggtcctcaa
gtagtcatattttgtatgcaccaccagcgatgtgtcccaagagccgaacatccagtttat
aatatggttatgtctgatataacaatatcttgtacaagtctggaaaaagaaaaaagggaa
gaagttcatagatatgtacaaatgatgggcggacgagtatacagagaccttaacatatca
gtaactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgcaaacctg
aagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaagagaaa
aaaataactagatatactgatataaacatggaagatttcaggtgtcctatctttcttggt
tgcataatctgtgtgactggtttaagtggcttagaccggaaggaagttcagcaactcaca
gttaagcatggaggtcaatacatgggacaattgaaaatgaatgaatgtacacacctcatt
gtgcaagaaccaaaaggtcagaaatatgaatgtgccaagagatggaatgtacactgtgtg
accacgcagtggttttttgacagtgttgaaaaaggtttttgtcaggatgaatccatgtac
aagacagaacctagaccagaagcaaagactatgcccaattcttcaactcctaccggccag
atgaacacaattgatagtcgtactctttcagatgtcagcaatatttccaacataaatgca
agttgcataagtgaatcgatatgtaattcacttaacagcaaactggaggctacccttgaa
aatctggaaaatctggatgtcagtgtatttcaagcacctgaagatttattagatggttgt
cggatatttctttgcggttttagtggcagaaagctagataaactgagaagacttattaac
agtggaggtggagttcgttttaaccagcttaatgaagatgtgactcatgttattgtggga
gattatgatgatgaattgaagcagttttggaataaatcagcccacaggcctcatgtagtg
ggagcaaagtggttgctagagtgtttcagtaaaggttatatactttctgaagaaccatat
atccatgctaattaccagccagtggaaattccagtttcagatccgcctgaaagtaaagca
gctgttttaataaagaagaacagcagcttctctaagaaagactttactcctagtgaaaag
catgagcaagctgatgaagatctgctctctcaatatgaaaatgatagctctacagtagtt
gagggtaagaagtctgaagctgagaagtctgaagttaggccctttaatgattctactcat
gttgagccgttgaatgattctactcacattttgcaagaagaaaaccagtcttctgtcagt
cattgcttccctgatgattctacagttactgaagaaggcttatttagccaaaagagtttc
ctcgttttgggttttagtactgaaaatgaaactaacattgcaaacatcataaaagaaaat
gctgggaaaatcatgtcccttccaagcagaactattgctgattatgccgtggttcctttg
ctggggtgtaaggtagaagctaccgtgggagaagtcgttacaaatacgtggctggttact
tgcatagactatcagactttgtttgatccagagtcgaatcctctcttcacaccagtccca
gtaatgacaggaatgactcctttagaggattgtgttatatcatttagccaatgtgctgga
gcagaaaaagagtctttaacattcctagcaaacctccttggagcaagtgttcaagaatac
tttgttcgcaaatcgaatgcaaagaaaggcatgcttgccagtactcatcttatattaaaa
gaatctgttggctctaaatatgaagctgcaaagaagtggaatttacctgcagttactgta
gcttggctgttggagactgctagaacgggaaagagagcagatgaaagccattttctgatt
gaaaattcatctaaagaagaacgaactttagaaatggaaataacaaatggaatcaatcta
aatccagatactgcagagcatcctggcacacacttgcaaactcacagaaaaaccgtcgtt
acacctttagatatgaaccactttcagagtaaagctttctgtgctgtggtctcacaacat
gccagacaggtttcagcctccccagcagtaggacaaccacttcagaaggagccctcatta
cacctggatacaccatcaaaattcctctccaaggacaaactcttcaagccttcctttgat
gtgaaggatgcacttgcagccttgcaaactccaggacgtcctagccaacagaaaaggaaa
ctgagtacaccactctcagaagtcattgtcagaaacttgaaacttgctttggcaaatagc
tctcgagatgctgtcgctctttctgccagcccccaactgaaggatgcccagtcaaagaag
gaagaagccccaaagccacttcacaaagtagtcgtgtgtgttagtaaaaaactcagtaag
aagcagagtgaactaaatgggatcgcagcctctctaggagcagattacaggtggagtttt
gatgaaacagtgactcatttcatctatcaagggcggccaaatgacacaaatcgggaatat
aaatctgtaaaagaaagaggagtacacatcgtttctgagcactggcttttagattgtgcc
caagagaataaacatcttcctgaatctctttatccacatacttataatcccaaaatgagc
ttggatatcagtgcagtgcaagatggccgactctgtaatagtcgactactctcagctgtg
tctgcaacaaagaatgatgagccagatcatttgattttagaagaaaatgatgtagacaat
atggccaccaataataaagaatcagcaccatcaaatgaaaatggaaggaatgactctaaa
ggagttctgacacagaccttagagatgagagagaactttcagaagcaattacaggagata
atgtctgcaacatccatagtgaaacaccaagggcagaggacttctctttcaagaagtggc
tgtaacagtgcatcttcaacccctgacagcactcgctctgctcgcagtggacgaagtaga
gtcctagaggcactgaggcagtctcgtcaaacaatacctgatgtcaacacggaaccctcc
caaaatgaacagatcatttgggatgaccctacagcaagggaggagagagcaaggcttgcc
agcaatttgcagtggcctagttgtcccacacaatactctgagcttcaggttgacattcaa
aacttggaggatcctccttttcaaaagcctttacccgattcagaaattgctaaacaggcc
atctgtgatcctggaaacatacgtgtgacggaagccccgaaacacctgatcactgaagaa
ctggaaactcccattaaagacagccacctgatccctacgcctcaagcccccagtattgcc
tttccgctcgccaacccccctgtggctccacaccctagagaaaagattataacaatagag
gatactcatgaagaattgaaaaaacagtacatattccagttatcatctctgaatcctcaa
gaacgtattgactattgtcatctgattgaaaaactaggtggattggtgatagaaaagcag
tgctttgatcccagctgtacacacattgttgtgggacatccacttcgaaatgagaagtat
ttgggctctgtggcagctgggaagtgggtgcttcatcgctgctaccttgaagcatgcagg
actgcgggacactttgtgcaggaagaagactatgaatggggaagtagttccatacttgat
gttttgactggaatcaatgtacagcaacgaagactagcacttgcagcaatgagatggaga
aaaaaaatccagcaaagacaagaatctggcattgttgagggagcatttagtgggtggaag
gttattttacatgtggatcagtctcgagaagcaggcttcaaacgccttcttcagtcagga
ggagcaaaggtgctacctggtcattccgtatctttatttaaagaggccacacatcttttt
tccgacttgaataaactgaaaccagatgactcgggagttaatatagcagaagctgctgcc
cagaatgtgtactgcttgagaacagaatatattgctgattatcttatgcaggaatcacct
cctcatgtagaaaattactgtctaccagaagctatttcatttcttcagaataataaggaa
cttgggcctggattatcacaaaaaaggaaagcttctacagaaaaaaataaaatcaaaaga
ccgagagtacactaa
DBGET
integrated database retrieval system
