Cebus imitator (Panamanian white-faced capuchin): 108288528
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Entry
108288528 CDS
T08783
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108288528 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cimi03036
]
108288528 (SMARCA1)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
108288528 (SMARCA1)
CERF complex
108288528 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
Motif
Other DBs
NCBI-GeneID:
108288528
NCBI-ProteinID:
XP_037586959
Ensembl:
ENSCCAG00000030817
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MEQDTAAVAATVAAADATATIVVIEDEQPGPSTSQEEGAAAAATEATAATEKGEKKKEKN
VSSFQLKLAAKAPKSEKEMDPEYEEKMKANRAKRFEFLLKQTELFAHFIQPSAQKSPTSP
LNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSPSYVKG
GPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVP
KSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVF
KKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPD
VFNSADDFDSWFDTKNCLGDQKLVERLHAVSNGRQEHSTFRYTKILMKDIDVLNSSGKMD
KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRV
LIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFRGQREAIEAFNAPNS
SKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITD
NTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIRHGATHVFASKESELT
DEDITTILERGEKKTAEMNERLQKMGESSLRNFRMDIEQSLYKFEGEDYREKQKLGMVEW
IEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFELLEKEIL
YYRKTIGYKVPRNPDIPNPALAQREEQKKIDGAEPLTPEETEEKEKLLTQGFTNWTKRDF
NQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAVFWERCNELQDIEKIMAQIERGEAR
IQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKNYTEEEDRFLICMLHKMGFDRENVY
EELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLISLIEKENMEIEERERAEKKKRSTKT
PMSQKRKAESATESSGKKDVKKVKS
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccgccgcagtggcagccaccgtggcagccgcggatgcgaccgccact
atcgtggtcatagaggacgagcagccggggccgtccacctctcaggaggagggagcggcc
gccgcggccaccgaagccaccgcggccacggagaagggcgagaagaagaaggagaaaaac
gtttcttcttttcaactcaaacttgctgctaaagcgcctaaatctgaaaaggaaatggac
ccagaatatgaagagaaaatgaaagccaaccgagcaaagagatttgaatttttactgaag
cagacagaactatttgcacatttcattcagccttcagcacagaaatctccaacatctcca
ctgaacatgaaattaggacgtcctcgaataaagaaagatgaaaagcagagcttaatttct
gctggagactaccgccacaggcgcacagagcaagaagaagatgaagagctactgtcggag
agtcggaaaacatctaatgtgtgtattaggtttgaggtgtcaccttcatatgtgaaaggg
gggccactgagagattatcagattcgaggactgaactggttgatctctttatatgaaaat
ggagtcaatggcattttggctgatgaaatgggtcttgggaaaactttacaaacaattgct
ttgcttggttacctgaaacactaccgaaatattcctggacctcacatggtattagttcca
aagtctactttacacaactggatgaatgaatttaaacgatgggtcccatctctccgggtc
atttgttttgtcggagacaaggatgccagagctgcttttattcgtgatgaaatgatgcca
ggagagtgggatgtttgtgttacttcttatgagatggtaattaaagaaaaatctgtattc
aaaaagtttcattggcgatacctcgtcattgatgaagctcacagaataaagaatgaaaaa
tctaagctttcagagattgttcgtgagttcaagtcaactaaccgcttgcttttaactgga
acacctttgcagaataacctgcatgaactgtgggccttactcaactttttgttgcctgat
gtctttaattctgcagatgactttgattcttggtttgacactaaaaattgccttggtgat
caaaaactcgtggaaagacttcatgcagtaagtaatggcagacaggaacattcaactttt
aggtatacaaaaatcctgatgaaagatattgatgttttaaactcttctggcaagatggac
aagatgcgactcttaaacattctgatgcagcttcgaaagtgttgtaatcatccgtatctg
tttgatggtgccgaacctggtccaccttacaccactgatgaacatattgtcagcaacagt
ggtaaaatggtagttctggataaactattggccaaactcaaagaacagggttcaagggtt
ctcattttcagccagatgactcgcttgctggacattttggaagattattgcatgtggcgt
ggttatgagtattgtcgactggatggacaaacccctcatgaagaaagagaggataaattc
ctagaagtggaatttcggggtcaaagggaagcaatagaggcatttaatgctcccaatagt
agcaaattcatctttatgctaagtaccagggctggaggtctcggaattaacctggcaagt
gctgatgtagttatactctatgattcagactggaacccacaggttgatctacaagctatg
gatcgagcacatcgtattggtcagaagaagccagtacgtgtattccgtctcatcactgac
aacactgttgaagagaggattgtagaaagagctgagataaaactgagacttgattcaatt
gttatacaacaaggaagactcattgaccaacagtctaacaagctggccaaagaggaaatg
ttgcaaatgatacggcatggagccacccacgtttttgcttctaaagagagtgagttgaca
gatgaagacattacaactattctggaaagaggggaaaagaagactgcagagatgaatgag
cgcctgcaaaaaatgggagagtcttctctaagaaattttagaatggacattgaacaaagt
ttatacaagtttgaaggagaagattatagagaaaaacagaagcttggcatggtggaatgg
atcgaaccgcctaagcgagaacgcaaagcaaactacgcagtggatgcctactttagagag
gctttgcgtgtcagtgagccaaagattccaaaggctccacggcctccaaaacagccaaat
gttcaggattttcaatttttcccaccacgcttatttgagctcctggaaaaggaaattctt
tattatcggaagacaataggctataaggtcccaagaaatcctgatatcccaaatccagct
ctggctcaaagagaagagcaaaaaaagattgatggagcagaacctcttacaccagaagag
actgaagaaaaggaaaaacttctcacacaaggtttcacaaactggactaaacgagatttt
aaccagtttattaaagctaatgagaaatatggaagagatgacattgataacatagctcga
gaggtagagggcaaatcccctgaggaggtcatggagtattcagctgtattttgggaacgt
tgcaatgaattacaggacattgagaaaattatggctcaaattgaacgtggagaagcaaga
attcaacgaaggatcagtatcaagaaagccctggatgccaaaattgcaagatacaaggct
ccatttcatcagttgcgcattcagtatggaacgagcaaaggaaagaactacactgaggaa
gaagatagattcttgatttgtatgttacacaaaatgggctttgatagagaaaatgtatat
gaagaattaagacagtgtgtacgaaatgctccacagtttagatttgactggtttatcaag
tctaggactgccatggaattccagagacgctgtaacactctgatttcattgattgagaag
gaaaatatggaaattgaggaaagagagagagcagaaaagaagaaacggtcaactaaaact
ccaatgtcacagaaaagaaaagcagagtcagctactgagagctctggaaagaaggatgtc
aagaaggtgaaatcctaa
DBGET
integrated database retrieval system
