Cebus imitator (Panamanian white-faced capuchin): 108289099
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Entry
108289099 CDS
T08783
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
108289099 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cimi04040
]
108289099 (SCN5A)
Ion channels [BR:
cimi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108289099 (SCN5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
108289099
NCBI-ProteinID:
XP_017363865
Ensembl:
ENSCCAG00000023536
UniProt:
A0A2K5Q719
LinkDB
All DBs
Position
Unknown
AA seq
2016 aa
AA seq
DB search
MANLLLPRGTSGFHRFTRESLAAIEKRMAEKQARGSAASQESRDGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPI
RRVAVKILVHSFFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIIMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRDFTTLNGTNGSVEADGSV
WESLDLYLSDPENYLLKNGTSDVLLCGNSSDAGTCPKGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTTHERRSKGRK
RMSSGTEECGEDRLPKSDSEDGPRAVNRLSLTHGLSRTSMKPRSSRGSIFTFRRRDLGSE
TDFADDENSTAGESESHHTSLLVPWPLRQTGAQGQPSPGTSAPGHALNGKKNSTVDCNGV
VSLLGAGDPEATSPGSHLLRPVMLEHPLDTTTPSEEPGGPQMLTPQAPCVDGFEEPEARQ
RALSAVSVLTSALEELEESHRKCPPCWNRFAQRYLIWECCPLWMSIKQGVKFVVMDPFTD
LTITMCIVLNTLFMALEHYNMTSEFEDMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMSNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRHSDSGLLPRWHMMDFFHAFLIIFRILCGEWI
ETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDRELNNLQ
LALARIQRGLRFIKRTTWDFCCGLLRQRPQKPAALAARGQLPSCIATPHSLPPPETEKAP
PARKETRFEEGERPGQGTPRYPETVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQ
PVSGGPEAPPDSRTWSQVSATASSEAEASASQADWQQQRKVEPRAPGCSETPEDSYSEGS
TADMTNTAELLEQIPDLGQDVKDPEDCFTEGCVRRCPCCAVDTTQAPGKVWWQLRKTCYR
IVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNN
KSQCESLNMTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQW
EYNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKK
LGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVNIL
TKINLLFVAIFTGECIFKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPT
LFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFP
HVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLLNSNGSRG
DCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYETWEK
FDPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKR
VLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQRS
MKHASFLFRQQAGSGLSEEDAPEREGLIAYMMNENFSRPPGPPSSSSISSTSFPPSYDSV
TRATSDNLQVRGSDDSHSEDLADFPPSPDRDRESIV
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctcctgttacctcggggcaccagcggcttccacaggttcacacgggagtcc
ctggcggccatcgagaagcgcatggcagagaagcaagcccgaggctcggccgcctcgcag
gagagccgagacgggctgccagaggaggaggcgccccggccccagctggacctgcaggcc
tccaaaaagctgccagatctttatggcaatccaccccgagagctcatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagactttcatcgtgctgaataaaggcaag
accatcttccggttcagtgccaccaacgccttgtacgtcctcagtcccttccaccccatc
cggagagtggctgtgaagattctggttcactcgttcttcagcatgctgatcatgtgcacc
atcctcaccaactgcgtgttcatggcccagcacgaccctccgccctggaccaagtatgtc
gagtacaccttcaccgccatttacacctttgagtctctggtaaagatcctggctcgaggc
ttctgcctgcatgcgttcaccttccttcgggacccatggaactggctggacttcagcgtg
attatcatggcatacacaactgaatttgtggacctgggcaatgtctcagccttacgcacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggcctgaagaccatcgtg
ggggccctgatccagtctgtgaagaagctggctgatgtgatggtcctcacggtcttctgc
ctcagcgtctttgccctcattggcctgcagctcttcatgggcaacctaaggcacaagtgc
gtccgcgacttcaccacgctcaatggcaccaacggctccgtggaggccgacggctcggtc
tgggaatccctggacctctacctcagtgacccagaaaattacttgctcaagaacggcacc
tctgacgtgttactgtgtgggaacagctctgacgctgggacatgtcccaagggctaccgg
tgcctaaaggcaggcgagaaccctgaccatggctacaccagcttcgattcctttgcctgg
gcctttcttgcactcttccgcctgatgacgcaggactgctgggagcgcctctatcagcag
accctcaggtccgcagggaagatctacatgatcttcttcatgcttgtcatctttctgggc
tccttctacctggtgaacctgatcctggccgtggttgccatggcctatgaggaacaaaac
caagccaccatcgctgagaccgaggaaaaggaaaagcgcttccaggaggccatggagatg
ctcaaaaaagaacacgaggccctcaccatcaggggtgtggataccgtgtcccgtagctcc
ttggagatgtcccctttggccccagtaaccacccatgagagaagaagcaaggggagaaaa
cggatgtcttcaggaaccgaggagtgtggggaggacaggctgcccaagtctgactcagaa
gatggtcccagagcagtgaatcgcctcagcctcacccacggcctcagcaggacatctatg
aagccacgttccagccgcgggagcattttcacctttcgccggcgagatctgggttccgaa
acagattttgcagatgatgaaaacagcacagcgggggagagtgagagccaccacacatca
ttgctggtgccctggcccctgcgccagactggtgcccagggacagcccagtcctggaacc
tcggctcctggccatgccctcaatggcaaaaagaacagcactgtggactgcaatggggtg
gtctccttgctgggggcaggtgacccagaggccacttccccaggaagccatctcctccgc
cctgtgatgctagagcaccccctagacacgaccacgccatcggaggagccaggcgggccc
cagatgctgaccccccaggctccgtgtgtagatggcttcgaggagccagaagcacggcag
cgggccctcagcgcagtcagtgtcctcaccagcgcgctggaagagctggaggagtctcac
cgcaagtgtccaccatgctggaatcgcttcgcccagcgctacctgatctgggagtgctgc
ccgctgtggatgtccatcaagcagggagtgaagtttgtggtcatggacccgttcactgac
ctcaccatcactatgtgcatcgtgctcaacacactcttcatggcgctggagcactacaac
atgacaagtgaattcgaggacatgctgcaggtcggaaacctggtcttcacggggattttc
acagcagagatgaccttcaagatcattgccctcgacccctactactactttcagcagggc
tggaacatcttcgacagcatcatcgtcatccttagcctcatggagctgggcctgtcccgc
atgagcaacttgtcggtgctgcgctccttccgcctgcttcgggtcttcaagctggccaaa
tcctggcccaccctgaacacactgatcaagatcatcgggaactcagtgggggcactgggg
aacctgacgctggtgctagccatcattgtgttcatctttgctgtggtgggcatgcagctc
tttggcaagaactactcagagctgaggcacagcgactcaggcctgctgcctcgctggcac
atgatggatttcttccacgccttcctcatcatcttccgcatcctctgcggagagtggatc
gagaccatgtgggactgcatggaggtgtctgggcagtcactgtgcctgctggtcttcttg
cttgttatggtcattggaaaccttgtggtcctgaacctcttcctggccttgctgctcagc
tctttcagcgcagacaacctcacagcccctgacgaggacagagagctgaacaacctccag
ctggccctggcccgcatccagcggggcctgcgcttcatcaagaggaccacctgggacttc
tgctgtgggctcctgcggcagcggcctcagaagcccgcagccctggccgcccggggccag
ctgcccagctgcattgccaccccacactccctaccacccccagagacagagaaggcgccc
cccgcccgcaaggaaacacggtttgaggaaggcgagcggccaggccagggcacccccaga
tatccggagaccgtgtgtgtgcccattgccgtggccgagtcagacacagacgaccaagag
gaggacgaggagaacagcctgggcacggaggaggagtccagcaagcagcaggaatcccag
cctgtgtccggtggcccagaggcccctccggattccaggacctggagccaagtgtcagcg
actgcctcctccgaggccgaggccagtgcatctcaggccgactggcagcagcagcggaaa
gtggaaccccgggctccagggtgcagtgagaccccagaggacagttactccgaaggcagc
acagcagacatgaccaacactgccgagctcctggagcagatccccgacctcggccaggat
gtcaaggatccagaggactgcttcactgaaggctgtgtccggcgctgtccctgctgtgcg
gtggacaccacacaggccccagggaaggtctggtggcagctgcgcaagacctgctaccgc
attgtggagcacagctggttcgagacgttcatcatcttcatgatcctgctcagcagtgga
gcgctggccttcgaggacatctacctagaggagcggaagaccatcaaggttctgcttgag
tatgccgacaagatgttcacctacgtcttcgtgctggagatgctgctcaagtgggtggcc
tacggcttcaagaagtacttcaccaacgcctggtgctggctcgacttcctcatcgtggac
gtctctctgatcagcctggtggccaacaccctgggctttgctgagatgggccccatcaag
tcactgcggacgctgcgggcactccgccccctgagagccctgtcacgatttgaaggcatg
agggtggtagtcaatgcgctggtgggcgccatcccatccatcatgaacgtcctcctcgtc
tgcctcatcttctggctcatcttcagcatcatgggtgtgaacctcttcgcggggaagttt
gggaggtgcatcaaccagacggagggagacttgcctttgaactacaccatcgtgaacaac
aagagccagtgtgagtccttgaacatgaccggcgaattgtactggaccaaggtgaaagtc
aactttgacaacgtgggggctgggtacctggcccttctgcaggtggcaacatttaaaggc
tggatggacattatgtatgcagctgtggactccagggggtacgaagagcagccccagtgg
gagtacaacctctacatgtatatctactttgtcgttttcatcatcttcgggtctttcttc
accctgaacctctttatcggtgtcatcattgacaacttcaaccaacagaagaaaaagtta
gggggccaggacatcttcatgacagaggagcagaagaagtactacaatgccatgaagaag
ctgggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggcttc
atattcgacattgtgaccaagcaggcctttgatgtcaccatcatgtttctgatctgcttg
aatatggtgaccatgatggtggagacagatgaccaaagtcctgagaaagtcaacatcttg
accaagatcaacctgctctttgtggccatcttcacaggcgagtgtattttcaagatggct
gccctgcgccactattacttcaccaacagctggaatatcttcgacttcgtggttgtcatc
ctctccatcgtgggcactgttctctcggacatcatccagaaatacttcttctccccgacg
ctcttccgagtcatccgcctggcccgaatcggccgcatcctcagactgatccgaggggcc
aaggggatccgcacgctgctcttcgccctcatgatgtccctgcctgccctcttcaacatc
gggctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccaacttcccc
catgtcaagtgggaggccggcatcgacgacatgttcaacttccagaccttcgccaacagc
atgctgtgcctcttccagatcaccacgtctgccggctgggacggcctcctcagccccatc
ctcaacacggggcccccctactgcgaccccaatctgctcaacagcaatggctctcggggg
gactgtgggagcccagccgtgggcatcctcttcttcaccacctacatcatcatctccttc
ctcatcgtggtcaacatgtacattgccatcatcctggagaacttcagcgtggccacggag
gagagcactgagcccctgagtgaggacgactttgacatgttctatgagacctgggagaag
ttcgacccagaggccactcagtttatcgagtactcggccctgtctgactttgccgatgcc
ctgtctgaaccgctccgtatcgccaagcccaaccagataagcctcatcaacatggacctg
cccatggtgagcggggaccgcatccactgcatggacatcctcttcgccttcaccaaaagg
gtcctgggggagtctggggagatggacgccctgaagatccagatggaggagaagttcatg
gcagccaatccatccaagatctcctacgagcccatcaccaccacactccggcgcaagcac
gaggaggtgtcggccaccgtcatccagagggcctttcgcaggcacctgctgcagcgctcc
atgaagcacgcctccttcctcttccgtcagcaggcgggcagcggcctctccgaagaggac
gcccctgagcgagagggcctcattgcctacatgatgaatgaaaacttctcccggccccct
ggcccgccctccagctcctccatctcctccacttccttcccaccctcctatgacagtgtc
actagagccaccagcgataacctccaggtgcgggggtctgacgacagccacagcgaagat
ctcgccgacttccccccatctccggacagggaccgtgagtccatcgtgtga
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integrated database retrieval system
