Cebus imitator (Panamanian white-faced capuchin): 108289744
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Entry
108289744 CDS
T08783
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
cimi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108289744 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108289744 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108289744 (CPSF6)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
108289744 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
108289744
NCBI-ProteinID:
XP_017364763
Ensembl:
ENSCCAG00000028149
UniProt:
A0A2K5QXP0
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtgggcatgatcagatagatttgtatgacgatgtcatatctccatct
gcaaataatggagatgccccagaagaccgggattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcggcaccaaatgttgtctatacgtatactggaaagaga
attgcattgtatattggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccagtcaaaggggtttgcccttgttggtgttggatctgaagcatcttcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggagggagttcccgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcctggtggggacagatttcctgggcca
gcaggaccaggagggccacctccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccctaggtcct
ccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcctcctcctcta
gctgggcctcctaatcgaggagatcgccctccaccaccagttctttttcctggacagcct
tttgggcagcctccattgggtccgcttcctcctggccctccacctccagttccaggctac
ggcccccctcctggcccaccacctccacagcagggaccacctccacctccaggccccttt
ccacctcgtccacctggtccacttgggccaccccttacactagctcctcctccgcacctt
cctggaccacctccaggtgctccaccgccagctccacatgtgaacccagctttctttcct
ccgccaactaacagtggcatgcctacatcagatagccgaggtccaccaccaacagaccca
tatggccgacctccaccatatgataggggtgactatggcccccctggaagggaaatggat
accgcaagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaacagggca
atctcaagtagtgctatttcgagagctgtgtctgatgccagtgctggtgattatggaagt
gctattgagacattggtaactgcaatttctttaattaagcaatccaaagtatctgctgac
gatcgttgcaaagttcttattagttctttgcaagattgccttcatggaattgagtccaag
tcttatggttctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgccataaatcccgtagtagagaccgtcatgacgattattataga
gagagaagcagagaacgagagaggcacagggatcgtgaccgagaccgtgaccgagagcgt
gaccgagagcgcgagtatcgtcatcgttag
DBGET
integrated database retrieval system
