Cebus imitator (Panamanian white-faced capuchin): 108290143
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Entry
108290143 CDS
T08783
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cimi04990
]
108290143 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
cimi04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
108290143 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
108290143
NCBI-ProteinID:
XP_017365343
Ensembl:
ENSCCAG00000026873
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MACPALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKETDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSVVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFSFPETIEEEGSEVGSADEDDPVGQMNPGRKPSHGGCELPDGSGKEHPSS
DGAVVTPAPKSEEKDAAEIQKRKRLEQAGIKVMPAAQRFASQKQLSEEKEVVRDIVLRKE
NSFLSHQHGNNSEAEGEVVCRLPDLEKDDFAARRARMNQTKPTVPLNQLLYGPYPKKGAD
KSDGSKQLSKGISNKRSLEYKRNQGYTEEVKSIVTCNARAQESEPAEEGELRKVPDLHKD
DLAQRRIQGSLAPHREPRSFITLSNITEADLETWERLKVSGKARDGDVQHISASEPSPEI
KAETAIRDDFANRKARASKKASSPRQKFVHFGPVTEIDQQKWKRLSIGKAGPREDEEEVI
RRGSKIQTDSMSPVSVGTSRLKGHQALNDYRTVNSGLGDYCKRASWLAPVPESQEEWVCS
LGECPRGTEEVTSKQLPQDGKEEMESALRDSKRLSKAERSEESSQPPACPLASGYEASGT
EEKLEKMTAPAWSGSGLKGQRKLDDSRKDDMMARRTGMSLGHTGSNPNQFLPVPFAKQQD
VEEYSKGPPMKDQRYGPRTPVSDDAESTSMFDMRCEEEAAVQPHSRARQEQLQLINNQLR
EEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQE
KERRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSS
FLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTVTPKAVPMLTP
KPYSQPKNSQEVLKTFKVDGKVSMNGETVHREEEKERESPTVAPAHSLTKSQMFEGVARV
HGSPLEMKQDNSSIEINIKKPNSVPQELTATTEKTEPNSQEDENDGGKPRKGNIELATSE
PQHFTTTVTRCSPTVAFVEFPSSSQLKSDVPEEKDEKKQENEMSGKVELVLSQKVVKPKS
PEPEATLTFPFLDKMPEANQLHLPNLSSQVDSPSSEKSPVTTPFKFWAWDPEEERRRQEK
WQQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTISSSSA
DQLSTSSSMTEGSGAMTKIDLENCQDEKQDRRWKKSFQGDVNDLLLKTRESDQLEEKGSL
TQGALVHSGNPVSKGVHEDHQLDTEAGSLHYGTNPQLAQDPSQNQQVSNAMHNAEDVKPK
TLPLDKSINHQIEPPSERQKKSPRENFQAGPFSPCSPTPPGQSPNRYKRSISGKKLCSSC
GLPLGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRS
AGQPTTL
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcccgctctcggtctggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttctccgaggcgcagaagtggatcgagcaagtaactggcagaagttttggt
gataaagattttcggacaggtttagaaaatggaatcctcctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggactggac
aatattatcttattcttgagaggttgtaaagagctcggcctaaaagaatctcaacttttt
gacccgagtgacctccaggatacatccaacagagtaacagtcaagagccttgattatagc
aggaagctgaaaaatgtattagttaccatttactggctgggaaaagcagcaaatagctgc
acatcctacagcggaacgacactaaacctgaaggagtttgaaggtttgttggctcagatg
cgaaaggagactgatgacattgagagtcctaaacgcagtatccgagacagtggctacatc
gactgctgggattcggagcgcagcgactccctctctcctcctcgccacggcagagatgat
tccttcgacagcctggattcctttggctctcgctctcggcagacgccttcaccagatgta
gtcctcaggggaagcagtgatgggagaggaagtgactctgaatccgacttgcctcatcgg
aagctgccagatgtgaagaaggatgacatgtctgcaaggcggacttcccatggtgagccg
aaatcagtagtgccttttaaccagtacctcccgaacaaaagcaatcagaccgcctacgtc
cctgcacctctgagaaagaagaaagcagagcgtgaggaataccgcaagagctggagtacc
gccacctcccccctgggtggggagaggcctttcagctttcctgaaacgatagaggaagag
gggagtgaagtggggtctgctgatgaagacgacccagttggccaaatgaatcctggtcgg
aagccttcccatggtgggtgtgaattacccgacggcagtggtaaggagcacccttcttca
gatggggctgtggtgacaccagctcccaagtctgaagaaaaagatgctgctgagatccaa
aagcgcaaaaggctagagcaagctggaatcaaggtcatgccagcagcacagcgctttgcc
agtcaaaaacaattaagtgaagagaaagaagttgttcgtgacattgtccttcgcaaagaa
aactctttcctgagccatcaacatggcaacaattcagaggcagaaggtgaagttgtgtgt
cgactgcctgatcttgagaaggatgactttgctgcaaggagagcaaggatgaaccaaacc
aagccaacggtgccattaaatcaactcctctatggcccttatccaaagaaaggggcagat
aaatcagatggcagcaaacagctctcaaagggaatctcaaataaaagaagtctagaatat
aaaagaaaccagggctacacagaagaggtgaagtcaatagtgacctgtaatgcaagagct
caggagagtgaacctgcagaagaaggagaactcaggaaggtgccagatcttcacaaggat
gacctggcccagcggagaattcagggcagccttgcccctcaccgtgagccccgaagcttc
attacactctccaacataacagaagccgacttggagacgtgggagagactcaaagtgtca
ggaaaggcaagggatggagatgttcagcatatctctgcttctgagccttccccagaaatt
aaagcagaaactgccatccgtgatgactttgccaaccgcaaagcaagggcctctaagaaa
gcttccagccccaggcaaaagtttgtgcactttggaccagtgacggagatagaccagcag
aaatggaaacggcttagcattggcaaggctgggcctagagaggatgaagaagaagtcatc
cgtcgtggcagcaagattcaaacggactctatgtctcctgtctcagtgggcacttccaga
ttaaaggggcaccaagcacttaatgactacagaacagtgaattctggcctaggtgactat
tgcaaaagggcctcgtggctggctcctgtgccggagtcccaggaagagtgggtctgcagt
ctgggcgagtgcccgagggggacagaggaagttacatccaaacagctgccacaggatggc
aaagaagaaatggaaagtgctctgagagattccaagaggctgtcaaaggcagaaagatca
gaggagagcagccagccaccggcgtgtcctctggcctctgggtatgaggcttcagggaca
gaagagaagttggagaagatgacagctcctgcctggagtggcagtggactgaaaggccag
cgaaagttggatgattcacgaaaagacgacatgatggccaggagaactgggatgtccctt
ggacacactggatccaacccaaaccagttccttccagttccatttgcaaagcaacaggat
gtggaagaatattctaagggtccacccatgaaagatcagagatacggtccaagaactcct
gtgtctgatgacgcagagagcacaagcatgtttgacatgcggtgtgaggaggaggccgcg
gtgcagccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagg
gaagaggacgacaaatggcaagatgacctggctcgttggaagagtcgtagaagaagtgtt
tctcaggacttaatcaagaaagaggaagaaagaaaaaaaatggagaagttactggctgga
gaagatgggacaagtgaacgaaggaaaagtattaaaacctacagagaaattgttcaggaa
aaagagcggagagagagagagttgcatgaagcgtataagaacgctcggtcccaggaggag
gcagaggggatccttcaacagtacatcgagaggttcaccatcagtgaagctgttcttgaa
cgcttggagatgccaaaaattctggaaagaagccattcaacagagccaaatttatcctcc
ttcctgaatgatcccaaccccatgaaatacctgcggcaacagtcactgcctccacccaaa
ttcactgccactgttgaaaccaccattgctcgtgccagtgttctggataccagcatgtca
gcaggcagtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacacct
aagccttactcccagcccaaaaattctcaagaggttctgaagacctttaaggtagatggg
aaagtcagcatgaatggagagacggttcatagagaggaggagaaggaaagagagagtccc
acggtggcacctgcccactccttaaccaagtcccagatgtttgaaggtgtggccagagtg
catgggtctccactggagatgaagcaagacaacagcagcatcgagatcaacataaagaag
ccaaactctgttccccaagagctcacagcaaccactgagaaaacggaaccgaatagtcaa
gaggatgagaatgatggtggaaaaccaagaaaagggaatatagaacttgccacatcagaa
ccacagcattttacaacaactgtgactcgatgcagccctactgtggcctttgtggaattt
ccctccagctcccagctgaagagtgatgtgccagaagaaaaagacgagaagaaacaagaa
aatgaaatgagtggaaaggtggagttggtgctgtcacaaaaggtggtaaagccaaaatct
ccagagccagaagcaacactgacatttccatttctggacaaaatgcctgaagccaaccaa
ctacatttgccaaatctcagttctcaagtggattctccaagcagtgaaaagtcacctgtt
acgacaccttttaagttctgggcatgggacccagaagaggagcgcaggcgacaggaaaag
tggcaacaggaacaggaacgtttgctccaggagagataccagaaggagcaggacaagctg
aaagaagagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatactatgag
gaggagcgtaagataattgaagacactgtggttccctttactatttcttcaagttccgct
gaccagctgtctacctcctcctccatgactgaaggcagtggggcaatgactaagatagat
ctggaaaactgtcaagatgaaaaacaagacagaagatggaagaaatcattccagggagac
gtcaatgacttattgctgaagactagggaaagtgatcaactggaggagaagggcagccta
actcaaggggccttggttcattctgggaaccctgtatcgaaaggagtccatgaagaccat
cagctggatactgaggctgggtccctacactatgggacgaacccacagctcgctcaggat
ccatcccagaatcagcaggtatcaaatgcaatgcacaatgcagaagacgtgaagccaaaa
accctcccactggataaaagcattaaccatcagatcgagcctcccagtgaaagacagaag
aaaagtccccgagagaacttccaggctgggcctttctctccctgttctcccacccctcct
ggtcagtcaccaaacaggtacaagaggtctataagtggaaagaagctgtgctcctcctgt
gggcttcctttgggtaaaggagctgcaatgatcatcgagaccctcaatctctattttcac
atccagtgtttcaggtgtggaatttgtaaaggccagcttggagatgcagtgagtgggacg
gatgttaggattcgaaatggtcttctgaactgtaatgattgctacatgcgatccagaagt
gccgggcagcctacaacattgtga
DBGET
integrated database retrieval system
