Cebus imitator (Panamanian white-faced capuchin): 108290589
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Entry
108290589 CDS
T08783
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108290589 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cimi01007
]
108290589 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cimi03016
]
108290589 (VARS2)
Enzymes [BR:
cimi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
108290589 (VARS2)
Amino acid related enzymes [BR:
cimi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108290589 (VARS2)
Transfer RNA biogenesis [BR:
cimi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108290589 (VARS2)
Prokaryotic type
108290589 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
108290589
NCBI-ProteinID:
XP_017365929
Ensembl:
ENSCCAG00000037907
UniProt:
A0A2K5SIJ8
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MPHLPLSSFRPPFLGLKPSRGLSRFHPVSTQSEPHGSPISRRNREAKQKRLREKQATLEA
GIAGESKSPAESIKAWSPKEVVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPWWVRE
GFFKPEYQAQLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKEQGVRRHELSREDFLREVWQWKEAKGGEICEQLRALGASL
DWDRECFTMDAGSSAAVTEAFVRLYKAGLLYRNRQLVNWSCALRSAISDIEVENRPLPGH
TELRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPLNVIAEDG
TMTSLCGDWLQGLHRFVAREKIMSVLSERGLFRGLQNHPMVLPICSRSGDVIEYLLKSQW
FVRCQEMGARAAQAVESGALELSPSFHQKSWQHWFAHIGDWCVSRQLWWGHQIPAYLVVE
DYAQGEEDRWVVGRSEAEAREAAAELTGRPGAELALKRDPDVLDTWFSSALFPFSALGWP
QETSDLAHFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMS
KSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIAAAAQKKDFPHGIPECGTDALRF
TLCSHGVQGGDLRLSVSEVQSCRHFCNKIWNALRFIFNALGEKFVPQPAEELSPSSPMDA
WILSRLALAARECERGFLNRELSLVTHALHHFWLHNLCDVYLEAVKPVLRHSPRPLGPPQ
VLFSCADLGLRLLAPLMPFLAEELWQRLPPRPGCPPAPSVSVAPYPSACSLEHWRQLELE
QHFSRVQEAVQVLRALRATYQLTKARPRVLLQSSEPGEQGLFDTFLEPLATLAHCGAVGL
LPTGAAAPSGWAQAPLSDTVQVYMELQGLVDPQIQLSLLAARRHKLQKQLDGLIARTPSE
GEAETQRQQKLSSLQLELSKLDKAVSHLRQLMDKPPTPGSLEL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctatcctcttttcgaccaccttttctggggctgaagccctcacgg
ggcctctccaggttccatcccgtttctacacagtcggaaccccatggatctcccatctcc
cggaggaaccgtgaagccaaacagaagcgcctgcgagagaagcaggcgactctggaggct
gggatagcaggggagagcaagtcgcctgcagagtccattaaggcctggagtcctaaggag
gtagtattgtatgaaatccctacaaaacccggtgaaaagaaagatgtctcggggcccctg
cctcctgcatacagcccccgatatgttgaggctgcctggtacccgtggtgggtacgagag
ggcttcttcaaaccagaatatcaggcccagctgccccaagctacaggggagaccttttcc
atgtgtatcccacctcccaatgtcacgggctccctgcacatcggccacgcactcacggtg
gccatacaggatgccctcgtgcgctggcatcgaatgcgtggggatcaagtgctgtgggtc
cctggttccgatcacgcgggaatcgctacccaagctgtagtggaaaaacaactgtggaag
gaacagggagtgaggagacatgaactgagccgggaggacttccttagggaggtgtggcag
tggaaggaggcgaaaggtggagagatctgtgagcagctgcgagctctgggtgcctccctg
gactgggatcgagagtgttttaccatggatgctggctcctcagcggctgtgactgaagct
tttgtgcgactctacaaggcggggttgctgtaccggaaccgtcagcttgtcaactggtca
tgtgctttaagatcagccatctcggacattgaggtggagaaccggccgctgcctggccac
acagagcttcgactgcctggctgccccacccctgtgtcttttggcctcctgttttctgtt
gccttccccgtggatggagagcctgacgcagaggttgtggtaggaaccacgaggccagag
acactgcctggggacgtggctgtggctgttcacccagatgactcccgttacacgcatcta
catgggcgacagcttcgtcaccccttgatggggcagcctctccccctcatcacagattat
gctgttcagccacatgtgggcacaggggccgtgaaggtgactccagctcacagtcctgcc
gatgctgagatgggggcccgacatggcttgagccccctgaacgtcattgcggaggatggg
accatgacctccctctgcggggactggctgcagggtcttcaccggtttgtggcccgggaa
aagataatgtctgtgctgagtgaacggggcctgttccggggcctccagaaccaccccatg
gtactgcccatctgcagtcgttctggggacgtgatagaatacctgctgaagagccagtgg
tttgtccgctgccaggaaatgggggcccgagctgctcaggctgtggagtcgggggccctg
gagctcagtccttccttccaccagaagagctggcagcactggtttgcccacattggggac
tggtgtgtctcccggcagctgtggtggggccatcagattccagcctacctggttgtagag
gactacgcgcagggtgaagaagatcgttgggtggttggacggtcagaggctgaggccaga
gaggcagcagcagaactgacagggaggccaggggcagagctggccctgaagagggaccct
gatgtcctggacacatggttctcttctgccctgttccccttttctgccctgggctggccc
caagagacctcagaccttgctcatttctacccgctgtcacttttggaaacgggcagtgac
ctcctgctgttctgggtgggccgcatggtcatgttggggacccagctcactgggcagctg
cctttcagcaaggtgcttcttcatcccatggttcgggacaggcagggccggaaaatgagc
aagtccctggggaatgtgctggacccaagagacatcatcagcggagtggagatgcaggtg
ctgcaggaaaagctgagaagtggaaatttggaccctgcagagctggccattgcagctgcg
gcacagaaaaaggactttcctcatgggatccctgagtgtgggacagatgccctgagattc
acactctgctcccacggagttcaggggggcgacttgcgcctgtccgtctctgaggtccag
agctgccgacatttctgcaacaagatctggaatgccctgcgcttcatcttcaatgcctta
ggggagaaatttgtgcctcagcctgctgaggagctgtctccctcctcccccatggacgcc
tggatcctgagccgccttgccctggccgcccgggagtgtgagcggggcttcctcaaccga
gagctctcacttgtcactcacgccctgcaccacttctggctccataacctctgtgacgtc
tacctagaggctgtgaagcctgtgctgcggcactcgccccgccccctggggccccctcag
gtcctgttctcctgcgctgaccttggcctccgcctcctggccccactgatgcccttcctg
gctgaagagctctggcagaggctgccccccaggcctggttgcccccctgcccccagcgtc
tcggttgccccctaccccagcgcctgcagcttggagcactggcgccagctggagctggag
caacacttctcccgggtccaggaggcagtgcaggtgctgagggctctccgagccacgtac
cagctcaccaaagcccggccccgagtgctgctgcagagctcagagcctggggagcagggc
ctctttgacaccttcttggagcccctggccaccctggcccactgtggggctgtgggcctg
ttacccacaggcgcagcagctccctctggctgggcccaggctccactcagtgacacagtt
caggtctacatggagctgcagggcctggtagacccccagatccagctatctctgttagct
gcccgaaggcacaagttgcagaagcagcttgatggcctcatagccagaaccccatcagaa
ggggaggcagagactcagaggcaacaaaagctttcttctctccagctggaattgtcaaaa
ttggacaaggcggtttctcacctccggcagctgatggataagcctccaaccccagggagc
ctggagctctaa
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integrated database retrieval system
