Cebus imitator (Panamanian white-faced capuchin): 108290608
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Entry
108290608 CDS
T08783
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108290608 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108290608 (DHX16)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108290608 (DHX16)
Spliceosome [BR:
cimi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108290608 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
108290608 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
SecA_DEAD
nSTAND3
Flavi_DEAD
Cas3-like_C_2
ATPase
SRP54
Motif
Other DBs
NCBI-GeneID:
108290608
NCBI-ProteinID:
XP_017365975
Ensembl:
ENSCCAG00000025435
UniProt:
A0A2K5QHJ3
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFLQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGSSLQK
KRKKRKHLRKKREEEEEEEEDEASEKGNKKTGGSKQQTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEDPSPPPASTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTEKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDAPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHAKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcggggctggagcgttgggttcaggacgagctgcactcggtgctgggg
ctgagtgagcggcacgtcgcccagttcctgatcggtaccgcgcagcgctgcacctcggct
gaggagttcctgcagcgcctgcgagacactgataccttggacctcagtggtccggcccgg
gacttcgccctgagactctggaacaaggtaccacgaaaggcagtggtagaaaagccagct
agggcagcagagcgggaggcgcgagcgctgctggagaagaaccgatcttataggttgctg
gaagacagtgaagagagcagtgaggagactgtgagtagggctgggagcagcctccagaag
aagcgtaaaaagaggaaacatctcaggaagaagcgtgaggaagaggaggaagaagaggag
gacgaggcttctgagaaggggaataagaaaacagggggaagtaaacagcagacagagaag
ccagagtcggaggatgagtgggaacggacagagcgggagcgccttcaggacctggaggag
cgtgatgcctttgctgagcgggttcgacagcgggacaaggatcggactcgaaatgtcctg
gagcggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggccgaggaa
gaccggaaggccatggtccctgagctgcggaagaaatctcgccgagagtacctggctaag
cgggaacgggagaagcttgaggacctagaggcggagctggctgatgaggagttccttttt
ggggatgtagagctgagccggcatgagcggcgggagctcaaatataagcggcgagtccgg
gatctcgcccgggagtaccgggcagctggggagcaggagaagctggaggccaccaaccgc
taccacatgcccaaggaaacccgaggacagccagctcgagctgtggatctagtggaggag
gaatcaggagcccctggggaggagcagcggcgctgggaggaggctcggcttggggcagcg
tccctgaagtttggggcccgagatgctgcctctcaggagcccaagtatcaactagtgctg
gaggaggaggagaccattgagtttgtgcgggccactcagctccagggtgatgaggatcca
tcacctccacctgcttcaactcaggcccagcagaaagagtccatccaggctgtccgccgc
agcctcccggtgttcccctttcgagaggagctcctggctgctattgctaatcaccaagtc
ctcatcattgaaggcgagacaggctcagggaagaccacccagatcccacagtatctcttt
gaggagggttatacagagaagggtatgaagattgcctgcacccagccccggagagtggcc
gccatgagtgtggccgcccgagtggcccgggagatgggtgtgaagctggggaatgaggtt
ggctatagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgaca
gatgggatgcttctccgggagttcctctctgagcctgaccttgcaagttacagcgtggtg
atggtggatgaggcacacgaacggaccctacacacagacattctctttggattgatcaag
gatgttgctcgcttccgacctgagctcaaggtcctggtggcttcagccacattggacact
gcccgtttctctaccttctttgatgacgcccctgtgtttcgaatccctggacgcaggttt
cctgtggacatcttctataccaaggctccagaggctgactacttggaagcttgtgtcgta
tctgtgttgcagatccatgtgacccagccccctggggatatcctggtgttcctgacagga
caggaagagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aaaatccgggagctcctggtgctgcccatttatgccaacctgccctctgacatgcaggcc
cgtatcttccagcccacaccacctggggcacgaaaggtggttgtggcaacaaacattgct
gagacatcacttaccattgagggcatcatttatgtgctggatccagggttctgtaagcag
aagagctacaacccccgcacaggaatggaatcgctcactgtcacaccctgcagcaaggcc
tcagctaatcagcgagctggcagggcaggtcgggtggctgcaggaaaatgcttccgcctg
tatactgcctgggcctatcagcacgagcttgaggaaaccacagtgcctgagatccagagg
accagcttgggcaatgtcgtgttgctactcaagagcttagggatccatgacctaatgcac
tttgatttcctggacgctccaccatatgaaaccctgctgctggctttggagcagctgtac
gccctaggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggcagag
ctgccggtggaccccatgctgtccaaaatgatcttggcctctgagaagtacagctgttca
gaggagatcctgacagtggctgccatgctgtctgtcaacaactccatcttctaccggcca
aaggacaaggttgtccatgctgacaatgcccgtgtcaacttcttccttcctggtggtgac
cacctggttctgctaaacgtttacacacagtgggctgagagtggttactcttcccagtgg
tgctatgagaactttgtacagttcagatcaatgcgccgagcccgagatgtgcgggaacag
ctggaagggctcttggaacgtgtggaagttggtctcagttcctgccagggggactatatc
cgtgtacgcaaggccatcactgctggttacttttaccacacagcacggttgactcggagt
gggtaccgcacagtgaaacagcagcagacggtcttcattcatcccaactcctccctcttt
gagcaacagccacgctggctgctctaccatgaacttgtcttgaccaccaaagagttcatg
agacaggtactggagattgagagcagttggcttctggaggtggctccccattattataag
gccaaggagctagaagatccccatgctaagaaaatgcccaaaaaaataggcaagacacga
gaagagctagggtga
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integrated database retrieval system
