KEGG   Cebus imitator (Panamanian white-faced capuchin): 108290975
Entry
108290975         CDS       T08783                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X2
  KO
K13175  THO complex subunit 6
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03013  Nucleocytoplasmic transport
cimi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108290975 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    108290975 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cimi03019]
    108290975 (THOC6)
   03041 Spliceosome [BR:cimi03041]
    108290975 (THOC6)
Messenger RNA biogenesis [BR:cimi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108290975 (THOC6)
Spliceosome [BR:cimi03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108290975 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_IP5PC_F EIF3I Beta-prop_WDR36-Utp21_1st WDR54 WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 108290975
NCBI-ProteinID: XP_017366614
Ensembl: ENSCCAG00000037487
UniProt: A0A2K5SG39
LinkDB
Position
Unknown
AA seq 341 aa
MERALPLVVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEMLKKGCKELWCRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTVFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgagctctgccgctcgtggtgcctctgggtcaggcagaggtgtttcaggccttg
cagcggctccatatgaccatcttctcccaaagcgtttcaccatgtgggaagtttctggcg
gctggcaacaattatgggcagatcgccatctttagcttgtctgctgctttgagctcggaa
gccaaagaggaaagtaagaagccagtggtgactttccaagcccatgatgggccggtctac
agcatggtctccaccgatcgacatctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcggagatgctcaagaagggctgtaaggagctgtggtgtcgtcagcctccatac
aggaccagcctggaagtgcctgagatcaatgctttgctgctggtccccaaggagaattcc
ctcatcctggctgggggagactgtcagttgcatactatggaccttgaaaccgggaccttc
acgcgggtccttcggggccacacagactacatccattgcctggcattgagggaaaggagc
ccggaggtgctgtcaggtggcgaggatggagctgttcgactttgggacttgcgcacagcc
aaggaggtccagacaatcgaggtctataagcacgaggagtgctccaggccccacaatggg
cgctggatcggttgtttggcaactgattccgactggatggtctgtggagggggaccagcc
ctcaccctctggcacctccgatcctccacacccaccaccgtcttccccatgcgggcgcca
cagaagcacgtcaccttctaccaggacctgattctgtctgctggccagggccgctgtgtc
aaccagtggcagctgagcggggagctgaaggcccaggtgcctggctcctccccagggctg
ctcagcctcagcctcaaccagcagccagccgcgcccgagtgcaaggtcctaacagctgca
ggcaacagctgccgggtggatgtcttcaccaacctgggctaccgagccttctccctgtcc
ttctga

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