Cebus imitator (Panamanian white-faced capuchin): 108292350
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Entry
108292350 CDS
T08783
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108292350 (RBM39)
Spliceosome [BR:
cimi03041
]
Common components
Common spliceosomal components
General mRNP proteins
108292350 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
108292350
NCBI-ProteinID:
XP_017368694
Ensembl:
ENSCCAG00000031689
UniProt:
A0A2K5RHX9
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgccaacggccacgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaagacga
cggagccgctcaagaagtcgagatcggagatttagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggaaagagatgcaaggacagtcttctgtatgcagctg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcggtgcctctagcaataggattaactggccaacgagttttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaatagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctttatgtgggttcattacactttaat
ataactgaagacatgcttcgtggaatctttgagcctttcggaaggattgaaagtatccag
ctgatgatggacagtgaaactggtcgatccaagggatatggatttattacattttctgat
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaaggcca
atgaaagttggtcatgtgactgaacgtactgatgcctcgagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtcttcagttaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacagcaggctctgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccagcagactgaagcttcagctttagctgcagctgcctctgttcagcca
cttgcaacacagtgttttcaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatgggggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccgtca
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacggcagcatatgtacctcttccaacttaccacaacctgtttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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