Cebus imitator (Panamanian white-faced capuchin): 108292934
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Entry
108292934 CDS
T08783
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108292934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108292934
Spliceosome [BR:
cimi03041
]
Complex A
Other components
Complex A specific factors
108292934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
108292934
NCBI-ProteinID:
XP_037589234
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MATRANATPLDFPSKKRKRSRWNPDTMEQKTVIPGMYAVIPAGLTREQEGAYIVQLQIED
LTRKLRTGDLGIPPNAEDRSPSPEPICNSEGKRLNTREFRTHKTLEEERHNLITEMVALN
PDFKPPADYKPTATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECSAKIMIRGK
GSVKEEKVGRKDSQMLPGEDEPLHALVTXNTVENIKKAVEQVRNILKQGIETPEDQNDLR
KMQLPELACLNGTLLEGDNRILRPWQISETCSITNTTVCTKCGGAGHISSDCXFQRPRYP
QSAQDKPRMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPTNNPPSPSLMS
TTQSHPTWMNSVTSESRPYHSMHEGGPGGPGGNPHSFPHPLPSLTGGHGRHPMQHNPSGP
PPPWMQPPPPPMNQGPHPPGHHGPPPVDQYLGSTPVGSGVYRLRQGKGMMPPLPPPPSGQ
PLPPPSGPLPPWQQQQQQLPPPLPLPSSSMASSTPLPWQQNTTTATTSAGTGSIPPWQQQ
QAAATASPGAPQMQGNPTMVPLPPGIQQPLPPGAPPPPPPXVPPPPPERPMDPSNFVTIM
GMGVAGMLPFWMPPATPLPPPQN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagagcgaacgccacgccgctggacttcccaagtaagaagcggaagaggagc
cgctggaacccagacacaatggaacagaagacggtgattccgggaatgtatgcggttatt
cccgctggacttactcgagaacaagaaggagcttacatagtgcaactgcagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaacgctgaggacaggtcc
ccttcccctgagcccatctgcaatagcgaggggaagcggctaaacacacgagagttccgc
acccacaaaacgctggaagaggagcggcacaacctcatcactgagatggttgcactcaac
ccggattttaagccacctgcagattacaaacctacagcaacacgtgtgagtgataaagtc
atgattccacaagatgagtacccagaaatcaactttgtggggctgctcattgggcccaga
gggaacaccctaaagaacatagagaaggagtgcagtgcgaagattatgatccgggggaaa
ggatctgtgaaagaagagaaggttgggcgcaaagacagccagatgttgccgggagaagat
gagccacttcatgccctggtcacgnccaatacagtggagaacatcaaaaaggcagtggaa
caggtaagaaacatcttgaagcagggtatcgagaccccagaagaccagaatgatctacgg
aagatgcagcttccggagttggcttgcttgaatgggacccttctggaaggcgacaacagg
atcttaagaccctggcagatttcagagacctgcagcattaccaacaccacagtttgtaca
aagtgtggaggggctggccacatctcttcagactgctaattccaaaggcctcgttatccc
caatcagctcaggataaaccacggatggataaagaatatttgtccctcatggctgaactg
ggtgaagcgcccgtcccagcatctgtgggttccacctctgggcctgccaccacacccctg
gccagcgcacctcgtcctgctgctcccaccaacaacccaccttcaccgtctctcatgtcc
accacccagagccacccaacctggatgaattctgtcacttcagagagtcggccttaccac
agcatgcatgaaggtggtcctggtgggcccggaggcaacccccacagcttcccacacccg
ttacccagcctgacaggtgggcatggcagacatcccatgcaacataaccccagtggaccc
ccacccccttggatgcagccaccaccacctccgatgaaccagggcccccacccacctggg
caccatggccctcctccagtggatcagtacctgggaagtacacccgtgggctctggggtc
tatcgcctgcgtcagggaaaaggtatgatgccgccgctgccaccgcctcccagtgggcag
cccctgccccctccctctggtcctcttcccccatggcaacagcagcagcagcagctgcct
ccgccactccctctgcccagcagcagtatggcttccagtacccccttgccatggcagcaa
aatacgacgactgccaccacaagcgctggcacagggtccatcccgccatggcaacagcag
caggcggctgccacagcttctccaggagcccctcagatgcaaggcaaccccactatggtg
cccctgccccccgggatccagcagcctctgccgcctggggcccctccccctccaccgcct
nnggttccgccccctcctcctgagcgtcccatggacccttctaactttgtcaccataatg
ggcatgggggtggccggcatgctgcccttctggatgcctccagctaccccactgcctcca
ccacagaactag
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