KEGG   Cebus imitator (Panamanian white-faced capuchin): 108293162
Entry
108293162         CDS       T08783                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03020  RNA polymerase
cimi03420  Nucleotide excision repair
cimi04623  Cytosolic DNA-sensing pathway
cimi05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108293162 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108293162 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    108293162 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cimi03021]
    108293162 (POLR2E)
   03400 DNA repair and recombination proteins [BR:cimi03400]
    108293162 (POLR2E)
Transcription machinery [BR:cimi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108293162 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     108293162 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     108293162 (POLR2E)
DNA repair and recombination proteins [BR:cimi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108293162 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 108293162
NCBI-ProteinID: XP_017369952
Ensembl: ENSCCAG00000025658
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctctggaaaatccgcaagaccatcatgcagcta
tgccatgaccgtggctacttagtgacccaggacgagcttgaccagacactggaggagttc
aaagcccagtttggggacaagccgagcgaggggcggccgcgccgcactgacctcaccgtg
ctggtggcacacaacgatgaccccaccgaccagatgtttgtgttctttccagaggagccc
aaggtgggcatcaagaccatcaaggtgtactgccagcgcatgcaggaggagaacatcacc
cgggccctcatcgtggtgcagcaggggatgacgccctccgccaagcagtccctggttgac
atggcgcccaagtacatcctggagcagtttctgcagcaggagctgctcatcaacatcaca
gagcacgagctggtccctgagcacgtcgtcatgaccaaggaggaagtgacggagctgctg
gcccgatataagctccgtgagaaccagctgcccaggatccaggcgggggaccccgtggct
cggtacttcgggataaagcgtggacaggtggtgaagatcatccggcccagcgagacggcc
ggcaggtacatcacctaccggctggtacagtag

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