Cebus imitator (Panamanian white-faced capuchin): 108293348
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Entry
108293348 CDS
T08783
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108293348 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cimi04091
]
108293348 (FREM1)
Lectins [BR:
cimi04091
]
C-Type lectins
Lecticans
108293348 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
108293348
NCBI-ProteinID:
XP_017370172
Ensembl:
ENSCCAG00000018800
UniProt:
A0A2K5PJB7
LinkDB
All DBs
Position
Unknown
AA seq
2181 aa
AA seq
DB search
MNSLSWGAVNALLLLLLLLLAWASPTFISVNRGVRVMKGHSAFLSGDDLKFAIPKEKDAC
KVEVVTNEPITQRVGKLTPQVFDCHFLPNEVKYVHNGCPILDEDTVKLRLYRFTETDTFI
ETFILRVYLLEPDCNIIRMSNNVLEVPEFNGLSQAIDKNLLRFDYDRMASLECTVSLDTA
RTRLPAHGQMVLGEPRPEEPRGDQPHSFFPESQLGAKLKCPGGRCTPGLKKIESLKVSCE
EFLLMGLRYQHLDPPSPNIDYISIQLDLTDSRSKIVYKSESAWLPVYIRAGIPNQIPKAA
FMAMYILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLLDHTRPISSF
TWKDLSDIQIAYQPPNSSHSERRHDEVELEVYDFFFERSAPMTVHISIRTADTNAPRVSW
NTGLNLLEGQSRAITWEQFQVVDNNDIDAVRLVTVGGLQHGWLTLREGKGFLFTVADLQA
GVVRYHHDDSDSTKDFVVFRIFDGHHSIHHKFPINILPKDDSPPFLITNVVIELEEGQTI
LIQGSMLRASDVDASDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIYY
RHFGGEIFEDSFEFVLWDSHEPPNLSVPQVATIHITPVDDQLPKEAPGVSRHLVVKETEV
AYITKKHLHFIDTESYDRELVYTITTPPFFSFSHRHLDAGKLFMVDSIPKVVKNPTALEL
RSFTQHAVNYMKVAYMPPMQDIGPHCRDIQFTFSISNQHGGTLHGICFNITVLPVDNQVP
EVFTNPLKVTEGGQGVISTEHILVSDADTKLNNIDLSLRGLPLHGRVELNGFPLNAGGTF
SWDDLHTLKVRYQHDGSEVLQDDILLEVTDGTNSAVFVLHVEVFPVNDEPPVLKADLMPV
MNCSEGGEVVITSEYISATDVDSDDLKLMFVIAREPQHGVVRKAGVTVHQFSQGDVISEA
VTYKHTGGEIGMMPCFDTITLVVSDGEAGPFVNGCCYNGPNPSVPLHESFPVYNLNITVY
PVDNQPPSIAIGPMFVVDEGCSTALTINHLSASDPDTAADDLEFVLVSPPQFGYLENILP
SVGFEKSNMGISIDSFQWKDMNAFHINYVQSRHLRTEPTADQFTVYVTDGKQHSVDIPFS
IIINPTNDEAPDFVVQNITVCEGQMKELDSSIIRAVDLDIPQDPLLFSITQNPRHGLLIS
GGFSKDFSENKQPANPDQKHAPVHNFSMELLKTGMRLTYVHDDSESLADDFTIQLSDGKH
KILKTISVEITPVNDEKPMLSKKAEIAVNMGETRIISSAILSAIDEDSPREKIYYVFERL
PQNGQLQLKIGRDWVPLSPGMRCTQREVDLNLLRYTHTGAMDSQNRDSFIFYLWDGDNRS
PALGCQITIKDMEKGDIVIFTKPLVVSKGDRGFLTTTTLLAVDGTDKPEELQYVITSPPR
YGQVEYVRYPGVPITSFSQMDIAGQTVCYVHKSKVTVSSDRFRFIISNGLWTEHGVFEIT
LETVDRALPVVTRNKGLRLVQGAVGLLSPDLLQLTDPDTPAENLTFLLVQLPQHGQLYLW
GTGLLQHNFTQQDVDSRNVAYRHSGGDSQTDCFTFMATDRTNQGFVVNGRMWEEPVLFAI
QVDQLDKTAPRITLLHSPSQVGLLKNGCYGIYITSRVLKASDPDTEDDQIIFKILQGPKH
GHLENTTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQIMDPTGNSATPQILEL
KWSHVEWSQTEYEVCENVGVLPLEIIRRGYSMDSAFVGIKVNQVSAAVGKDFTVTPSKLI
QFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPS
YSSNQSKHRTWEKGVWRLLPPGSSSSTTSGSFHLERRPLPSSTQLAVTRGDTLWGFDSTH
FSQRKLRTRGNGKTVHPSSVYRNGTDIIYNYHGIVSLKLEDDSFPSQKRKAKVSITSQPQ
KTIKGAELPQADKVESTTGSHFPRQDHLTSFPKNCTLELKGLFHFEEGIQKLYQCNGIAW
KAWSPQAKDVEDKSCPAGWHHHSGYCHILITEQKGTWNAAAQACREQYLGNLVTVFSRQH
MRWLWDIGGRKSFWIGLNDQVRAGHWAWIGGEPVFFINGRRGLSQHSKPGKSCVLVQRLG
KWQTKDCRRAKPHNYVCSRKV
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atgaactctctgagttggggggcggtgaatgccctgctgctactgctgctgctcctcttg
gcctgggccagccccaccttcatcagtgtcaaccgtggggtgagggtgatgaagggccac
tccgccttcctgtcaggagatgacctgaagtttgctatccccaaagagaaagatgcctgc
aaagtggaagttgtgacgaatgagccaataacccagagggttgggaaactcactccacag
gtctttgactgccatttccttcccaatgaagtcaagtatgttcacaatggttgtccaatt
cttgatgaagacacagtgaagctcagactttacagatttactgaaacagataccttcata
gaaacctttatcctgcgagtctatcttctggaaccagactgtaacatcatccgtatgagt
aacaatgtgctggaggtgcctgaattcaatggactgtcccaagcaattgataaaaatctg
ctcagattcgattatgataggatggctagcctggaatgcacggtcagcctggacactgcg
agaactcgactgccagcccatggtcagatggtgctgggggagcctcggccagaagaacct
cgtggagatcagccacacagttttttcccagagtcccaactgggagcaaaactgaagtgt
ccaggtggaagatgtaccccaggattaaagaaaatagaaagcctcaaagtgagctgtgag
gagttcctgctgatggggcttcgttatcagcatctggatcccccttcacccaacatcgat
tatatctccatccagctggacctcacagatagcaggagtaaaattgtgtacaagtcagag
agtgcatggctgcctgtctatatcagagctggaattccaaatcagattccaaaggctgcg
ttcatggccatgtatattctggaagtggatcagttcatcctgacctccttgactacatca
gttctggactgtgaagaagacgagacccctaaacctttgctggtgttcaacattactaaa
gccccgcttcagggctatgtgactcacctgttggatcacaccagaccgatctcctcattc
acctggaaggatctcagtgacatacagatcgcctatcagccaccaaacagcagccattct
gagaggagacatgatgaggtagaattggaggtatacgacttcttctttgaaaggagtgca
cctatgacagtccacatctccatcagaacagcagatacaaatgccccccgtgtatcctgg
aatacaggtctgaatctcctggaggggcagtctcgagccatcacttgggaacagtttcag
gttgtcgacaataatgacattgatgctgtccggctagtcaccgttggtggcctgcagcat
ggatggctgacattaagagaggggaaaggatttctcttcactgtggctgacctccaggct
ggagttgttcgctatcatcacgatgacagtgactccactaaagacttcgtggtcttccgg
atatttgatggccatcacagcatccatcacaaattccccatcaacatcctgcccaaagat
gatagtcccccgttcctcataaccaatgttgtgattgaactggaggaagggcagaccatc
ctgatccagggatccatgctgcgagcttcggatgtggatgccagtgatgactacatcttc
ttcaatatcacgaaacctccacaggctggggagatcatgaagaagccagggccaggactg
ataggctatcctgtgcctggtttccttcagagggatttgtttaatggaatcatttattat
cgtcactttggtggagaaatctttgaagattcttttgaatttgtcctgtgggacagccat
gaacctccaaatctttcagtgccacaggtggcaacaatccatatcactccagtggatgac
cagcttccaaaggaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtg
gcctacataactaagaaacatctacattttatagatacagaatcatatgacagggagctg
gtctacacaataactactcctccatttttctccttcagccacagacacttggatgctggg
aaattattcatggtggacagcataccaaaggtagtcaaaaatcctacagccctggagctg
aggtcattcactcagcatgctgtaaactatatgaaagtggcctacatgccccctatgcaa
gacattggcccccactgcagagatatccagttcacattttctatcagtaaccaacatggc
ggcactttgcatgggatctgctttaacattacagtcctcccagtggacaatcaagttcct
gaggtattcaccaaccctctgaaagtgactgagggaggtcaaggtgtcatcagcacagag
cacattctggtttctgatgcagataccaagctgaacaatattgacctctccctgcgggga
ctgcctctgcacggaagggtggaactgaatggatttcctctaaatgcaggaggcacattt
tcttgggacgatctccataccttaaaagttaggtatcaacatgatggatctgaggttctt
caggatgacatactcttggaggtcaccgatggcacaaattcagcagtgtttgttctacat
gttgaggtattccctgtcaatgatgaaccaccagtcctaaaggcagacctcatgcctgtc
atgaattgctcagagggaggagaggtggtcatcacctccgaatacatttctgctactgat
gtggacagtgatgacttgaagttgatgtttgtgattgctcgagaacctcagcatggggtg
gtgaggaaagctggagtcacagtgcatcagttctctcagggagatgttatctcagaggct
gtgacatacaaacacacaggtggcgagattggcatgatgccttgttttgacaccataacg
ttggtggtttcggatggagaggctggcccttttgtgaatggctgctgctacaatggacct
aatccatctgttcctcttcatgagtcctttccagtgtataatctcaacatcacagtatat
ccagtagacaaccagccaccttccattgcaataggtcccatgtttgttgtagatgagggc
tgctcaacagcccttaccattaaccatttgtccgccagtgaccctgacactgcagcagat
gacttggaatttgttttggtgtctcctcctcagtttggctacctcgaaaatatactccct
tctgtgggttttgaaaaaagcaatatgggcataagtatagattcatttcagtggaaagac
atgaatgcttttcacattaactatgtgcagtccaggcatctgaggacagaaccaactgcc
gaccagttcacagtatacgtcacagatgggaagcaacactccgtggatataccattttct
attatcatcaaccccacaaatgatgaagctcctgactttgtagtgcagaatattactgtg
tgcgagggccagatgaaagagctggactcttccatcatcagagccgtggacctggacatt
ccccaggatcccttgctgttcagcatcactcaaaatccacgccatggcctcctcatcagt
ggagggtttagcaaagacttctctgagaataagcagccagccaaccctgaccagaaacat
gcgcctgtccacaacttttccatggaactcctcaagactggaatgaggttgacatatgtg
cacgatgactcagagagccttgctgatgattttacaatccagttgtcagatgggaaacat
aagatacttaaaaccatttcagtggagatcaccccagttaatgatgaaaaaccaatgctg
agcaagaaggctgaaattgcagtgaatatgggggaaactcgtattatttctagtgctatt
ctttcagccatagatgaagactcgcccagggagaagatttactatgtatttgaaaggctt
ccccaaaatgggcaacttcagcttaagatagggagggactgggttcctctctcccctggc
atgagatgcactcaaagggaagtggatctaaacttgctgagatacacacatactggggca
atggattcccagaatcgggatagcttcatcttctacctttgggatggcgacaacaggtcc
cctgctcttggctgtcaaatcaccatcaaggacatggaaaaaggtgatattgtcatcttt
acaaaaccacttgtggtgtctaaaggtgacagaggtttcttaacgaccaccactctcctg
gctgtggatgggacagacaagcctgaggaactgcaatatgtcatcacctcccctccacgg
tatggccaggtcgaatatgtccgctatcctggagttcccattacaagcttcagccaaatg
gatatagccgggcagacagtttgctacgtacacaagagcaaggtgactgtctccagtgac
agattcagattcatcatcagcaatggactgtggaccgagcatggggtgtttgagatcaca
ctggagactgtggacagagccctgcccgtggtaaccaggaacaaggggttgagactggtc
caaggggctgtgggcctgctttcccctgacctccttcagctgactgaccctgacacacct
gcagagaacctcaccttcctcttggttcagcttccccagcatggccagctctacctgtgg
gggacagggctgcttcaacacaatttcacccagcaggatgtggacagcaggaatgtggcc
tatcggcactcaggaggggactcacagactgactgctttactttcatggccacagacagg
acaaaccaaggctttgttgtgaatgggagaatgtgggaagaacctgttttattcgccatt
caggtggaccagttggacaaaacagctccccgtatcacactcttgcattccccttctcaa
gtggggctcctgaaaaatggctgctatgggatttacatcacttcccgcgtgctgaaggca
tcagaccctgacactgaggacgatcagatcatctttaaaattttacaaggtccaaaacat
ggacatctggagaacacaacaacaggtgaatttatccatgagaaatttagccaaaaggac
ttaaacagtaagaccattctttacatcataaacccatctttggaagtaaattcagatacc
atggaatttcaaatcatggatcccacagggaactcggccactcctcaaattttggaattg
aagtggtctcatgttgagtggtcacagactgaatatgaagtctgtgagaatgtgggtgtg
ttgcccttggaaattatcagaaggggatattccatggactcggcctttgtgggtataaag
gtcaaccaagtgtcagctgcagttggaaaagatttcaccgtgactccatctaaactgatt
cagtttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggatta
gaggaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcagttcttggc
acaaagacaaaagctgcagtgaaaattttggactcaaaaggaggacagtgccatccttca
tattcctccaatcaaagcaagcacagaacatgggagaagggcgtttggcgtctgctgccc
ccagggtcttcctcatccaccacttctggttcctttcatctggaaagaagacctcttcca
tcttccacgcagctagcagtcaccaggggagacaccctgtggggctttgattctacacat
ttttctcaaaggaagcttaggacccgtgggaatggcaaaacagttcatccatcctctgtt
tatagaaatggaacagacatcatctataattatcatgggatcgtttccttgaaactggag
gatgacagttttccaagtcagaaaaggaaggccaaagtatccatcactagtcagccccaa
aagacaattaagggggcagaactgcctcaagcagataaggtggaatccacaactggctca
cacttccccagacaggaccatttgacctcatttccaaagaattgcactctggaattaaag
ggactcttccattttgaagaaggcatccagaagctgtatcagtgcaatgggattgcctgg
aaagcctggagtccccaagccaaggatgtggaggacaaatcctgcccagctgggtggcac
catcactcaggctattgtcacatcttgatcacagagcagaaaggcacctggaatgcagct
gcccaagcttgcagggaacaatacctgggcaaccttgtaactgtattctccaggcagcac
atgcgatggctctgggacattggtgggagaaagtccttctggataggtttgaatgatcaa
gtgcgtgctggccactgggcatggatcggtggtgaacctgtcttcttcatcaatgggaga
agagggctctctcaacactccaagcctggaaagagctgtgttttggttcaaagattaggg
aaatggcaaacaaaagactgtaggagagccaaacctcacaattatgtatgttccagaaaa
gtttaa
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integrated database retrieval system
