Cebus imitator (Panamanian white-faced capuchin): 108293431
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Entry
108293431 CDS
T08783
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X2
KO
K14308
nuclear pore complex protein Nup54
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03013
Nucleocytoplasmic transport
cimi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108293431 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108293431 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108293431 (NUP54)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108293431 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
108293431
NCBI-ProteinID:
XP_017370278
Ensembl:
ENSCCAG00000037093
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPVGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFGTG
FGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPSNK
DEDGLVVLVFNKKETEIRSQQQQLVESLHKVLGGNQTLTVNVEGTKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGELNAPT
QFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNEPIHIRGGVFS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattttggggctccctcgggcacctccggcaccgctgcagccactgcggcc
cccgtgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
actacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggctttgggacaacatctacaactgcaggttctgcattcagcttttctgcccccactaac
acaggcactactggactcttcggtggtactcaaaacaaaggttttggatttggtactggt
tttggcacaacaacgggaactagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcaacagcagcagcaaactacattaggtggtctcttcagt
cagcctacacaagctcctacccagtcgaaccagctgataaatactgcaagtgctctttct
gctccaacgctattgggagatgagagagatgctattttggcaaaatggaatcaactgcag
gccttttggggaacaggaaaagggtatttcaacaataatattccgccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgcatgcccagtaataaa
gatgaagatgggctagtggttttagttttcaacaaaaaagaaacagagattcgaagccaa
cagcaacagttggtagaatcattgcataaagttttgggaggaaaccagacccttactgta
aatgtagagggcactaaaacattgccagatgatcagacagaagttgtcatttatgttgtt
gagcgttcaccaaatggtacttcaagaagagttccagctacaacactatatgcccatttt
gaacaagccaatataaaaacacagttgcagcaacttggtgtaaccctttctatgactaga
acagaactttctcctgcacagatcaaacagcttttacagaatcctcctgctggtgttgat
cctattatctgggaacaggccaaggtagataaccctgattctgaaaagttaattcctgta
ccaatggtgggttttaaggaacttctccgaagactgaaggttcaagatcagatgactaag
cagcatcaaaccagattagatatcatatctgaagatattagtgagctacaaaagaatcaa
actacatctgtagccaaaattgcacaatacaagaggaaactcatggatctttcccataga
actttacaggtcctaatcaaacaggaaattcaaaggaagagcggttatgccattcaggct
gatgaagagcagttgcgagttcagctagatacaatacagggtgaactaaatgcacctact
cagttcaagggccgactaaatgaactgatgtctcaaatcaggatgcagaatcattttgga
gcagtcagatctgaagaaaggtattacatagatgcagatcttttaagagaaatcaagcag
catttgaaacaacaacaggaaggccttagccatttgattagcatcattaaagatgatcta
gaagatataaagttggtcgaacatggattgaatgaacccatccacatcagaggtggtgtc
tttagttga
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