Cebus imitator (Panamanian white-faced capuchin): 108293534
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Entry
108293534 CDS
T08783
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108293534 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cimi03009
]
108293534 (TCOF1)
Ribosome biogenesis [BR:
cimi03009
]
Eukaryotic type
90S particles
Other 90S particles
108293534 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
108293534
NCBI-ProteinID:
XP_017370455
Ensembl:
ENSCCAG00000033791
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLRAGYVRAAREVKEQSGQKCFLAQPVTLLDIYTHWQQTSELG
RKRKAEEDAALQAKKTRVSDPISTSESSEEEEEAEAETAKATPRPASTNSSVTGADLISS
MKEKAKAETEKAGKTGNSMPHPATGKMVAHLPSGKSPRKSAEPSANTTLVSETKEEVSIP
AFGAAAKPGMVSADQADSSSEDTSSSSDETDVEGKPSVKPAQVKASVSTKESPARKAVPG
LGKVGDVTPQARGGALPPSSRAKKPEEESESSEEGSESEEEAPAGTPSQVKASEKILQLR
AASAPAKGTPGKVAAPAPPGKAGPIASQAKAGKPEEDSESSSEESSDSEEETSAAKVLLQ
ASAKTPQVKAASAPAKESPRKGAALAPPGKTGPAAAKAQAVKREEDSESSSEESDSEEEA
PAQAKPSGKTPQVRAALAPAKESPRKGAALTPPGKTVPAPTPPGKTGPAAAQAQAGKREE
DSGSSSEESDSDEEAPAAMSTAQVKPLGKNPQVRPASTVGTGPLGKGASPVPPGKVPPGK
RKEDSESSSEESSDSDDGEVPIAVAPAQEKSLGKILQAKPASGPAKGPLGRGPAPVPPQE
AGPVAIQVKAEKPTEDSESSEESSDSEEAPAATTAAQAKPALKAPQTKACPKKTNTTASA
KVTPVQVGTQPLRKAGTGTSAGSSPAVAWGAQRPAEDSSSSEESVSEEEKTGPAVTMGQA
KSVGKGLQVKAASVPVKGPLGQGTAPVLPGKTQPSITQVKAEMQEDSESSEEESDSEEAA
ATPAQVKNSVKKTQAKANPAATRASSAKGTISAPGKVVGAAAQARQRSPAKVKPQARNPQ
NSAVLVRGPASVPPVGKAVAQTGPEEDSGSSEEESDSEEETEMPARMKPSGKSPQVRAAL
APAKESPRKGAGPAPPGKTGPLTAQAGRQKDDSESSSEESDSDGEAPAAVTSAQVLSPQK
DGNSKPARSKTLVPAPPERNMEGSSESSEEELPLTQVIKPPLIFVDPNRSPAGPAATPAQ
AQAASTPRKARASESTARSSSSESEDEDMISATQCLTPAIRTNVVTVPTTHPRTAPKGST
ARASSNKESSRISDGKKQEGPATQVLKKNPASLPLTQAALKVLAQKASEAQPPVARTQPS
SGVDSAVGTLPATSPQSTPVQARGTNKLRKPKLPDGQQAAKAPGSSDDSEDSSDSSSGSE
EDAEGPQVAKSAHRLGSTPSRMETLVEETTAESSEDDVVAPSQSLLSGYVTPGLTLANSQ
ASKATPKPNSNPSVSSTLAAKDDPDSKQEAKLQQAADTLSPKTGGKEAVSGTKHQKSQKP
KKGAGNPQASTLALQSNIAQRLLGQPWPLSEAQVQASVMKVLTELLEQEKKKAADVIKES
SRKGWESRKRKLSGDQPVARNKKKKLGTGEGGEASVSPEKASMTSKGKAKRDKASGGIKE
KKGKGSLGSEGAKDKPEEELQKGMGKVEGGDQSNPKSKKEKKKSDKRKKDKEKKEKKKKA
KKASTKDPESLSQKKKKKKEEDTRADCMMSISTSHRDFLAER
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcggcgggagctacttccccttatctaccaccatctgctgcgg
gctggctatgtgcgcgcggcgcgggaagtgaaggaacagagcggccagaagtgtttcctg
gcccagcccgtaacccttctggacatctatacacactggcaacaaacctcagagcttggc
cggaagcggaaggcagaggaagatgcggcactacaagctaagaagacccgtgtgtcggac
cccattagcacctcagagagctcggaagaggaagaggaggcagaagccgaaaccgccaaa
gccaccccaagaccagcatctaccaactcctcagtcacgggggcagacttgatatcaagc
atgaaagagaaagccaaggcagagacagagaaagccggcaagacggggaactccatgcca
caccctgccactgggaagatggtggcccaccttccctctgggaagtctcccaggaagtca
gcagagccctcagcaaatactacgttggtctcagaaaccaaggaagaggtcagcatccca
gcttttggagctgctgccaagcccgggatggtgtcagcggatcaggccgacagctccagc
gaggacacctccagctccagcgatgagacagatgtggaggggaaaccctcagtaaaacca
gcccaggtcaaagcctcagtttctaccaaggaatctccagcaagaaaggcagtcccaggc
cttggaaaggtgggggatgtgacaccccaggccagaggaggggccttgcccccatccagc
agggccaagaagccagaagaggagtcagagagtagtgaggaggggtctgaaagcgaggag
gaggcccctgcagggacaccaagccaggtaaaggcctctgagaaaattctccagctcaga
gctgcctctgcccctgccaaggggacccctgggaaagtggctgccccagcaccccctggg
aaggcagggcctatagcctcccaggccaaggcagggaagccagaggaggactcagagagc
agcagcgaggagtcatctgacagtgaggaagagacatcagccgccaaggtcctgcttcag
gcctcagcaaaaacccctcaggtcaaagctgcctcagcccctgccaaggagtcccccagg
aaaggagctgccctggcgccccctgggaagacggggcctgcagctgccaaggcccaagcg
gtgaagcgggaggaggactcggagagcagcagcgaggagtcggacagtgaagaggaggca
cctgctcaggcgaagccttcagggaagaccccccaggtcagagctgccttggcccctgcc
aaggagtcccccaggaaaggggctgcactgacaccccctgggaagacagtgcctgccccg
acacctcctgggaagacagggcctgcagccgcccaggcccaggcggggaagcgggaggag
gactctgggagcagcagtgaggagtcggacagtgacgaggaggcacctgcagccatgagc
acagctcaggtgaagcccttggggaaaaacccccaggtgagacctgcctccactgtgggc
acagggcccttggggaaaggcgccagcccagtgccacctgggaaggtgccacctgggaag
aggaaggaggactcagagagcagcagtgaggagtcgtcagacagtgatgatggagaagtg
cccatagctgtggccccagctcaggaaaagtccttggggaaaatcctccaggctaaacct
gcctcaggtcctgccaaggggcccttgggaagggggcctgccccagtgccccctcaggag
gcagggcctgtagccatccaggtcaaggctgaaaagcccacagaagactcagagagcagc
gaggagtcgtcagacagtgaggaggcaccagcagccacgactgcagctcaggcaaaacca
gctctgaaagctcctcagaccaaggcctgcccaaagaaaaccaataccactgcatctgcc
aaggtcacccctgtgcaagtgggcacccaaccccttcggaaagcaggaactgggacttca
gcaggctcatccccagctgtggcctggggtgcccagagaccagcagaggactcttcaagc
agtgaggagtcagttagtgaggaagagaagacaggtcctgcagtaaccatgggacaggcg
aagtctgtggggaaaggcctccaagtgaaagctgcctcagtgcctgtcaaggggcctttg
gggcaagggactgccccagtactccctgggaagacgcagccttcaatcacccaggtgaaa
gctgagatgcaggaagactctgagagcagtgaggaggaatcagacagtgaggaggcagcc
gcgactcctgcacaggtgaaaaactcagtaaaaaaaacccaggccaaagccaacccagct
gccaccagagcatcttcagcgaaagggacaatttcagctcctggaaaagttgttggtgca
gctgctcaagccagacagagatctccagccaaggtaaagccacaagcaagaaacccccag
aacagtgccgtcttggtgaggggcccagcatctgtgccacctgtgggaaaggcagtggct
cagacaggaccagaggaggactcagggagcagtgaggaggagtcggacagtgaggaggag
acagagatgccagctcggatgaagccttcagggaagagcccccaggtcagagctgccttg
gcccctgccaaggagtcccccaggaaaggggctggcccagcacctcctgggaagacaggg
cctttgaccgcccaggcggggaggcagaaggatgactcagagagcagcagtgaggagtca
gacagtgatggggaggcaccggcagctgtgacctctgcccaggtcttgtcccctcagaag
gatggtaactccaaacctgccagaagcaagaccctggtcccggcacctccagagaggaac
atggaggggtcctcagagagcagtgaggaagagctgccactgacccaggtgattaaaccc
cctctgatttttgtcgaccctaatcgtagtccagctggcccagctgctacccccgcacaa
gcccaggctgcgagcaccccgaggaaggcccgagcctcggagagcacagccaggagttcc
tcctctgagagcgaggatgaggacatgatctccgctacacagtgcttgactcctgccatt
agaaccaacgtggtgactgtgcctaccacccacccaaggacagcccccaaaggcagcacg
gctagggccagcagcaacaaggagtccagtcggatatcagatggcaagaaacaggaggga
ccagccactcaggtgttaaagaagaacccagcttccctcccactgacccaggctgccctg
aaggtcctcgcccagaaagccagtgaggctcagcctcctgttgccaggacccaaccttca
agtggggttgacagcgctgtgggaaccctccctgcaacgagtccccagagcacccccgtc
caggccagaggaaccaacaagctcagaaaacctaagcttcctgatggccagcaggccgcc
aaagcccctgggagctcagatgacagtgaggacagcagcgacagctcttcagggagcgag
gaagatgctgaaggtccccaggtggccaagtcagcccaccggctaggttccactccctcc
aggatggagaccctggtggaggagaccacagcagaatccagcgaggatgacgtcgtggcg
ccatcccagtctctcctctcaggttatgtgacccctggactaaccctggccaattcccag
gcctcaaaagccactcccaagccaaactccaacccttcagtttcctctactctggccgcc
aaagatgacccagatagcaagcaggaggcaaagctccaacaggcagcagacaccttgtcc
cctaaaacaggtggaaaagaggctgtctcaggcaccaaacatcagaagtcccagaagccc
aaaaaaggggctgggaacccccaggcctcaaccctggcgctgcaaagcaacatcgcccag
cgcctcctgggccaaccctggcccctgagcgaggcccaggtgcaggcctcggtgatgaag
gtcctgactgagctgctggagcaggaaaaaaagaaggcggcggatgtcatcaaggagagc
agcaggaagggctgggagagccgcaagcggaagctgtccggagaccagcctgttgccagg
aacaagaagaagaagctggggactggagaaggtggggaggcctctgtctccccagaaaag
gcctccatgacttccaagggaaaagcaaagagagacaaagcaagtggcggcatcaaggag
aagaaggggaaggggtctcttggctccgaaggggccaaggacaagccagaagaggagctt
cagaaggggatggggaaggttgaaggtggagatcaaagcaacccaaagagcaagaaggag
aagaagaaatcagacaagagaaaaaaagacaaggaaaaaaaggaaaagaagaagaaagca
aaaaaggcctcaaccaaagatcctgagtcactatcccagaagaaaaagaagaaaaaagaa
gaagacaccagagcagactgtatgatgagcatcagcacaagtcacagggattttctagcc
gagcggtga
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integrated database retrieval system
