Cebus imitator (Panamanian white-faced capuchin): 108294229
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Entry
108294229 CDS
T08783
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
cimi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108294229 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
108294229 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108294229 (PABPC5)
03041 Spliceosome [BR:
cimi03041
]
108294229 (PABPC5)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108294229 (PABPC5)
mRNA cycle factors
Stress granule specific factors
108294229 (PABPC5)
Spliceosome [BR:
cimi03041
]
Complex C
Other components
Complex C specific factors
108294229 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_10
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
108294229
NCBI-ProteinID:
XP_017371498
Ensembl:
ENSCCAG00000032154
UniProt:
A0A2K5RJU1
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggggagcctaatcctgctggcaagaaaaagaagtatctcaaggcagctctg
tacgtgggtgacttggacccagatgtcaccgaggacatgctctataagaagttcaggcct
gctggccctctgcgattcacccgaatctgccgtgatccggtgacccgcagccccctgggc
tatggttatgttaacttccgctttcccgcggatgcagagtgggccttgaacaccatgaat
tttgatttgattaatggaaagccattccgccttatgtggtctcagccagatgaccgctta
agaaagtctggagtgggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gccctgttttacttattttctgcttttgggaacattctgtcctgcaaagtcgtatgcgat
gacaacggctctaagggttatgcctacgtgcactttgacagcctggccgctgccaataga
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtatgttggcagattc
aaattcccagaagagcgggcggctgaggtcagaaccagggatagagcaactttcaccaat
gttttcgttaaaaacattggagacgacatagatgatgaaaaactgaaggaacttttctgt
gaatatgggccaactgagagtgttaaagtaataagagatgccagtgggaaatccaaaggt
tttggatttgtgagatatgagacacacgaggctgcccaaaaggctgtgctagacttgcat
ggaaagtccatcgatggaaaagtcctctatgtagggcgagcgcagaagaaaattgaacgc
ctggctgagttgaggcggagatttgaacgactgaggttaaaagaaaaaagtcggccccca
ggggtgcctatctatattaagaacttggatgagacaatcaatgatgaaaaactgaaggag
gaattttcttcctttgggtcaattagtcgggccaaagtcatgatggaagtggggcaaggc
aaaggatttggtgtcgtctgcttttcctcttttgaagaggccaccaaagcagtggatgag
atgaatggtcgcatagtagggtccaagcccctgcatgtcaccctgggccaggccaggcgc
aggtgctga
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integrated database retrieval system
