Cebus imitator (Panamanian white-faced capuchin): 108295059
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Entry
108295059 CDS
T08783
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cimi03000
]
108295059 (SOX30)
Transcription factors [BR:
cimi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108295059 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
LCE6A
Motif
Other DBs
NCBI-GeneID:
108295059
NCBI-ProteinID:
XP_017372578
Ensembl:
ENSCCAG00000024037
LinkDB
All DBs
Position
Unknown
AA seq
761 aa
AA seq
DB search
MERARPEPPPQPRQLPRVPPPRPLRPAPPPLPVEGASFWAAAGEPPPSPPTPGVAAIATL
ASSCGEAASAGLQSAARRLVQVNPEQVLLLPQPQAGDEDAAASPAQARLLQFRPDLLLLP
SPAASEGAPFRPDLHPVQPRVLHVKAEKQELGPGLDPSVGPQGAVETGPRASRAVKVEGP
GPALDYFRGNEKGKLEAEVMRDARQGGEGKSPAATLEGVIKTEEPERLLEDCRLRAEPAS
NGLVHGSAEVILAPPSGAFGPHQQDLRIPLTLHTVSPGARIQFQGAPPSELIRLTKVPLT
PVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHR
PALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGK
RKRFPLSVSNVFSGTTQNIITTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLP
TPAVQRPSPVTLFQPSVSSAAQVTAQDPSLPLHPALPPQRFAGPSQTDTLRLHSEATHTV
KRPTPVSLESPNRISTSASTAHARFATSTIQPPKEYSSISACPRSARIPQAPPIPHPHVY
QPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYY
EDTYQKHEAIFSALNREYPFRDYQDERTHSENSRSCENIDGTSYYNSHSHSGEEYLNPVP
QLDIGTLENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggagagggccaggccggagccgccgcctcagccgcgccaactgccgcgggttcctcca
ccgcgcccgttgcgtcccgctccgcccccgctgccggtcgagggtgcctccttttgggca
gcggccggggagccccctccgtcgccgcccacaccgggcgtggccgccattgcgacgctg
gcttcctcgtgcggggaggccgcgtcggccggcttacagtcagcggcgcggcggctggtg
caggtgaacccggagcaggtgttgctgttaccacagcctcaggccggagacgaagacgcc
gctgcctcgcccgcgcaggcgcgactgctgcagtttaggcccgacctgctgctcctgccg
tcgccggccgcgtccgagggcgcccccttcaggcccgacttgcacccggtgcagccgcgg
gtgctgcatgtcaaggccgagaagcaggagctggggcctggcctggacccgtccgtgggg
cctcagggggcggtggagaccggccctagagcctccagggcggtcaaggtggaaggcccc
gggcccgccctcgactacttccgagggaacgagaagggcaagctggaggcggaggtcatg
cgggacgcgaggcaaggcggggaaggcaaaagcccggcggccaccctagaaggagtcatc
aaaacggaggaacccgagagactcctggaggactgcaggctccgcgccgagcccgcgtcc
aatggcctggttcatggcagcgcggaggtcatcctggccccgccgtccggtgcctttggg
cctcaccagcaagacctgaggatccctttgactctccacaccgtttcgcccggggcccga
atccagtttcagggagctccgccttcagagctgataagattgaccaaggtccccctgaca
ccagtgcctattaaaatgcagtccctactggagccttctgtaaaaattgaaaccaaagat
gtcccgctcaccgtgttgccctcagatgcaggcataccagatactcccttcagtaaggac
agaaatggtcatgtgaagcgacccatgaatgcatttatggtttgggcaaggatccaccga
ccagcactagccaaagccaacccagcagccaacaatgcagaaatcagtgtccagctcggg
ttagagtggaacaaacttagtgaagaacaaaagaaaccctattacgatgaagcacaaaag
attaaagaaaagcacagagaggaatttcctggttgggtttatcagcctcgtccagggaag
cgaaaacgcttccctctaagtgtttccaatgtattttctggtaccacacagaatatcatc
actacaaatcctacaacagtttatccttaccgctcacctacgtactctgtggtaattccc
agcctacagaaccccatcactcatccagttggtgaaacctcacctgccatccaactgccc
acacctgcagtccagcgcccaagccctgtcacacttttccagcccagcgtctccagtgct
gctcaggtgactgcccaggatccaagtctgcctctccacccagcactcccaccccaacga
tttgctgggccttcccaaacggacacccttcggctgcattctgaagccactcacactgtg
aagcgacccacccctgtctctctagagagccccaacaggatttcaactagtgcaagtact
gcccatgccagatttgcaacttcgaccatccaacctcctaaggagtattccagcatttct
gcttgcccaagaagtgctcggatcccccaggctcctcccattccacacccacatgtctac
cagccccctcccctgggccatccagccacactgtttgggacaccaccaagattctctttt
catcacccttacttcctaccgggacctcactacttcccatcaagcacgtgcccttatagt
cggcctccctttggctatggaaattttccaagttctatgccagaatgccttggttattat
gaagacacgtaccaaaaacatgaggctatattttcagctttaaatagagagtatcctttt
agagactaccaagatgaacgcacacacagcgaaaattctcggagttgtgagaacatagat
ggaacctcttactataacagtcatagccacagtggggaagaatacttaaaccctgtgcct
cagctggacattggaaccttggagaatgtcttcacagccccgacatcaactccttctagc
atccagcaagtcaatgtcactgacagtgatgaggaggaagaagaaaaagtactcaggaat
ttataa
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