Cebus imitator (Panamanian white-faced capuchin): 108295772
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Entry
108295772 CDS
T08783
Symbol
NXF3
Name
(RefSeq) nuclear RNA export factor 3 isoform X1
KO
K14284
nuclear RNA export factor
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03008
Ribosome biogenesis in eukaryotes
cimi03013
Nucleocytoplasmic transport
cimi03015
mRNA surveillance pathway
cimi05014
Amyotrophic lateral sclerosis
cimi05164
Influenza A
cimi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108295772 (NXF3)
03015 mRNA surveillance pathway
108295772 (NXF3)
03008 Ribosome biogenesis in eukaryotes
108295772 (NXF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
108295772 (NXF3)
05168 Herpes simplex virus 1 infection
108295772 (NXF3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108295772 (NXF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108295772 (NXF3)
03009 Ribosome biogenesis [BR:
cimi03009
]
108295772 (NXF3)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108295772 (NXF3)
mRNA cycle factors
Stress granule specific factors
108295772 (NXF3)
Ribosome biogenesis [BR:
cimi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108295772 (NXF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
Tap-RNA_bind
LRR_NXF1-5
NTF2
TAP_C
Motif
Other DBs
NCBI-GeneID:
108295772
NCBI-ProteinID:
XP_017373560
Ensembl:
ENSCCAG00000024028
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MGHSDQAVQRRARCWDMYQRRFSSVSQPVNLGMHSSSHQQQDGDAAMQGAHVESPVRYTP
YAISPSHRRGSFLKQDQTHVNMEREQKPPERRVEVNRPHETLGSWFKITIPFGIKYSEKW
LLNLIQNKCSVFFIPVEFHYEKMNATFFVENASIASALKNVSGKIWDEDNEKISIFVCPD
GIPDSVQREPKSEKVEQVKLAVNQQQALDIQKLPVYSDFMTCDTKMVRNPRKGMAASLHV
HEENIPKVMSSGEMDKWKGIEPGEKCMDRSPVCTTFLDNSSNINSILELFPKLLCLDGQQ
SPGPTLCGLEAHKRLPTCKGSFFGSEMLKNLVLQFLQQYYLIYDSGDRQGLLGAYHDEAC
FSLSISFNPGDSALSILFKYFKDNRNIKMLQDPYLRGQLLKHTKCDIVDFLSALPKTQHD
LSSILVDMWYQTKWMLCFSVNGVFKEVEGQSQGSVLAFTRTFIATPGSNSSLCIVNDELF
LRGASHQRTQSALFTLVPTPFSSFMPAFSQEQQQMGQGFSAQSGMNFQWSQKCLHNNQQD
YSRAVPVLAPPKVYVPVTESGDLAGAKKPKPNSQG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacagtgatcaagctgttcaaagaagagcaagatgttgggatatgtaccaaagg
agatttagcagtgtgtctcaaccagtcaatcttggcatgcattcttcatcccatcagcag
caagatggagatgcagcaatgcagggtgcccatgtggaatctccagtaagatacactccc
tatgccatttcaccctctcatcggagaggcagttttcttaaacaagaccaaacccatgtc
aacatggagagagagcaaaaacctccagagagaagagtggaggtgaacaggcctcatgag
acattagggagctggttcaagatcacaattccattcggcataaaatacagtgagaaatgg
ctgctgaatttgattcagaacaaatgcagtgtatttttcatcccagttgagtttcactat
gaaaaaatgaatgccaccttctttgtggagaatgccagcatcgcctctgcactgaagaat
gtcagtggcaagatttgggatgaggataatgaaaagatatcaatctttgtctgccctgat
ggtatacccgactctgtgcagagggagccaaagtcggaaaaggtggagcaggtaaagctg
gctgtgaaccaacaacaagctcttgatatccagaaactccccgtttactcagactttatg
acctgtgatactaaaatggtacggaatcctagaaagggcatggctgcctccctgcacgtc
catgaagagaacatacctaaggtgatgtcttcaggggagatggacaagtggaaagggata
gagccaggagagaagtgcatggacagaagcccagtgtgcaccaccttcctggataactcc
agcaacataaactccatcctggaattgttccccaaattattatgcttggatggccagcag
tcacctggaccaactctatgtggtcttgaagcccacaagaggttaccaacctgtaaggga
agcttctttggatctgagatgctgaagaatctggtcctgcaattcctgcagcagtattac
ttgatctatgactctggagatcgacagggtctcctcggtgcttaccatgatgaggcctgc
ttctccctgagcatttccttcaaccctggggactcagccctgagcatcttgtttaagtac
ttcaaggataacaggaatataaaaatgctccaggacccctaccttcgggggcagctgctg
aagcacacaaaatgtgacattgtggacttcctcagtgcattgcccaagacgcagcatgac
ctcagctccatcctggtggacatgtggtaccagacgaaatggatgctctgcttttctgtc
aatggggtgttcaaggaagtggaaggacagtctcagggttctgttctcgccttcacccgg
accttcattgctacccctggtagcaattccagtttatgcatcgtgaatgatgagctcttt
ttgcggggtgccagccaccaaaggacccagagtgccttgttcaccctagtgcccacaccc
ttctccagcttcatgcctgccttctcccaggagcagcagcaaatggggcagggtttctct
gcccagtccgggatgaacttccagtggtctcagaagtgccttcataacaaccagcaggac
tacagcagagctgttccggttcttgcaccgcccaaggtgtacgtccctgtgactgaatcg
ggagatctggctggggctaagaagccaaagcctaactcacagggctga
DBGET
integrated database retrieval system
