Cebus imitator (Panamanian white-faced capuchin): 108296312
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Entry
108296312 CDS
T08783
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03013
Nucleocytoplasmic transport
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108296312 (UPF3A)
03015 mRNA surveillance pathway
108296312 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108296312 (UPF3A)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108296312 (UPF3A)
mRNA cycle factors
P-body specific factors
108296312 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
108296312
NCBI-ProteinID:
XP_017374252
Ensembl:
ENSCCAG00000018406
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MRSEKEGAGGPRAAVAARGASGREKLSAVEVQFHRDSPQREPETPPTSSSGCGGGAGKPR
EEKRTALSKVVIRRLPPGLTKEQLEEQLHPLPAHDYFEFFAADLSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFLDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIEDDPEYKKF
LETYCVEEEKTSTNPEILLGEMEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERR
RRELEKKRLREEEKRRRREEERCKKRETDKQKKTAEREVRIKLLKKPEKGEEPTTESPKE
RGEEIDPGVGKQESSTPGAVIKVRPAEGSLEEPQEMSRNGSDKEHRDVERSQEKELEAQR
PHVDDGRRHRAYHEPDRLSRRSEDEQRWGKGPAQDRGKKGSQDSGAPGGAVERPGRAQRC
DDSPAPRKERLANKDRPALQLYDPGARFRARECGGSGRNCKAETSGTGPENREEAE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaaaaggagggggccggaggcccgagggcggccgttgccgcgcgaggcgcg
agcgggagagagaagctatcggccgtagaggtgcagttccaccgcgattcgccgcagcga
gagccggagacgccgccaacgtcgtcctccggctgtgggggcggtgcgggcaaacctcgc
gaggagaagaggacggccctgagcaaggtggtcatccgccgcctgcccccggggctcacc
aaagagcagctggaggagcagctgcacccgctgcccgcgcacgactacttcgagttcttc
gccgccgacctgagtctttatcctcatctctattcaagagcgtacattaattttaggaat
cctgatgacatccttctttttagagatcgttttgatggatatatcttccttgacagcaaa
ggcctagaatatcctgcagtggtagagtttgctccattccagaagatagccaaaaagaag
ctgaaaaaaaaagatgccaagactggaagcatcgaagacgatccagaatataagaagttt
ttagaaacctactgtgtggaggaagagaagaccagcaccaaccctgagattctgctgggg
gagatggaggcgaagacaagagagctcattgctagaagaaccacacctcttttggaatat
attaaaaatagaaaattagaaaagcagagaattcgggaagagaagcgagaagaacggagg
aggagagagttagaaaagaaacgcttgcgggaagaggagaaaagaagaagaagagaagaa
gaaagatgcaaaaaaagggagacagataaacagaagaaaactgcagagagagaagtaagg
attaagcttcttaagaaaccagaaaagggagaggaaccaaccacagagagtccaaaagaa
agaggagaggagattgatcctggagttggcaagcaggaatccagtacccccggcgcagtc
ataaaagtcaggcccgcggaaggctcgctggaggagccccaggagatgtcacgcaacggc
agtgacaaagagcacagggatgtggagagatctcaagaaaaagagcttgaagcacagaga
ccccatgtggatgatggcaggaggcacagagcttaccacgagcctgaccggctttccaga
aggagtgaagatgagcagagatgggggaaaggacctgcccaggacagagggaagaagggg
agccaggacagcggggccccagggggtgccgtggagagacccgggagagctcagaggtgt
gacgacagtccagcacccagaaaggagcgactggcaaacaaggaccggccggccttgcag
ctatatgatccgggagctcgcttccgagctcgagagtgtggtggaagcgggaggaactgc
aaggcagaaacgtcggggactggtcctgagaacagggaagaggcagagtga
DBGET
integrated database retrieval system
