Cebus imitator (Panamanian white-faced capuchin): 108296834
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Entry
108296834 CDS
T08783
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
cimi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108296834
09123 Folding, sorting and degradation
03018 RNA degradation
108296834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108296834
03041 Spliceosome [BR:
cimi03041
]
108296834
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108296834
mRNA cycle factors
Stress granule specific factors
108296834
Spliceosome [BR:
cimi03041
]
Complex C
Other components
Complex C specific factors
108296834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
RRM_3
ATP-grasp_2
YflT
Sulfatase
POP1_C
Motif
Other DBs
NCBI-GeneID:
108296834
NCBI-ProteinID:
XP_037591112
Ensembl:
ENSCCAG00000031444
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MNPSARSYLMASLYVGDLHPDVTETMLYDKFSPVGPIFSIRVCRDMVTGRSLGYAYVNFQ
QPLDADRALNTMNFDVIKGKPVRIMWSHRDPSLRKSGVGNIFIKNLDKSIDSKALYDTFS
TFGNILSCKLVCDENGSKGYGFIHFETQEAAESAIEKMNGMLLNDRKVFVGPFKSRKQRE
AEFEARAKEFTNVYVKNFGEDMDNECLKGLFSKFGPVLSVKVMTDGSGKSKGFGFVNFKR
HENAQKAVDEMNGKELNGKQIYVARAQQKGERQTELKRKFEQMKRDKITRYQGVNLYVKN
LDDSIDDERLRKEFSPFGKITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTKMKGRILAT
KPLYVALAQCKEERQAHLTNKYMQRMASVRAVPNPVIHPYQPAPPSGYFMAVFPQTQNRA
AYYVPSQIVQLRPNPCWIAQGGRPHPFQNMPSATHPAAPRLPFSTMAPAFSQIPRVMSTQ
RVANTSTQRMGPCPAAAAAAATPAVHTFPRHTYAARVRNPQQRLHAQPQVTMQQPTVHVQ
GQETLTASMLASPAPQEQK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccgcagctacctcatggcctcgctctacgtgggggacctccaccca
gacgtgactgaaacgatgctctacgacaagttcagcccggtcgggcccatcttctccatc
cgggtctgcagggacatggtcactggccgctccttgggctacgcgtatgtgaacttccag
cagccgttggacgcggatcgtgctttgaataccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcaccgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatctggacaaatccattgatagtaaagcactgtatgatacattttct
acttttggtaacatcctctcatgtaagttggtttgtgatgaaaatggttccaagggctat
ggatttatacactttgagacacaagaagcagctgaaagtgctattgaaaaaatgaatgga
atgctcctaaatgatcgcaaagtatttgttggaccatttaagtctcgtaaacaacgagaa
gctgaatttgaagctagggcaaaagagttcaccaatgtttacgtcaagaattttggagaa
gatatggacaacgagtgccttaagggtctctttagcaagtttgggcctgtcttaagtgtg
aaagtgatgactgatggaagtggaaaatccaaaggatttggatttgtaaattttaaaagg
catgaaaatgcacagaaagctgtggatgagatgaacggaaaggagctcaatggaaaacaa
atttatgttgctcgagctcagcaaaagggggaacggcagacagaacttaagcgcaaattt
gaacagatgaagcgtgacaagatcaccagatatcagggtgttaatctttatgtgaaaaat
cttgatgatagtatcgatgatgaacgtctccgcaaagagttttctccgtttggcaagatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacaaaaatgaaaggtagaattctggccaca
aagccattgtatgtagctttagctcagtgcaaagaagagcgccaggctcacctcactaac
aagtatatgcagagaatggcaagtgtacgagctgtacccaaccctgtgatccacccctac
cagccagcacctccttcaggttatttcatggcagttttcccacagactcagaaccgtgct
gcatactacgttcctagccaaattgttcaactaagaccaaatccttgctggattgctcag
ggtggcagacctcatccattccaaaatatgcccagtgctacccatccagctgctcctaga
ctaccatttagcactatggcaccagctttttcacagattcctcgagtcatgtcaacacaa
cgtgttgctaacacatcaacgcagaggatgggcccatgtcctgcagctgcagctgctgca
gctactcctgctgttcacacctttccacggcatacgtatgctgcaagagttcgcaatcct
cagcaacgtcttcatgcacagccacaagttacaatgcaacaacctactgttcatgtacaa
ggtcaggaaactttgactgcttccatgttggcatctcccgctcctcaagagcaaaagtaa
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integrated database retrieval system
