Cebus imitator (Panamanian white-faced capuchin): 108297961
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Entry
108297961 CDS
T08783
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03022
Basal transcription factors
cimi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108297961 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
108297961 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108297961 (ERCC3)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108297961 (ERCC3)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108297961 (ERCC3)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108297961 (ERCC3)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108297961 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
108297961
NCBI-ProteinID:
XP_017376170
Ensembl:
ENSCCAG00000024421
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAEVSGGPSTSRVTDPQG
KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagagaccgggcagaccgagacaagaagaaatccaggaagaggcactatgag
gatgaagaggatgatgaagaggacgcccctgggaacgaccctcaggaagcggttccctcg
gcggcggggaagcaggtggatgagtccggcaccaaagtggatgaatatggagctaaggac
tacaggctgcagatgccgctgaaggacgaccacacctccaggcccctctgggtggctcct
gatggccatatcttcttggaagccttctctccagtttacaaatacgcccaagacttcttg
gtggctattgcagagccagtgtgccgaccaacgcatgtgcatgagtacaaactaactgcc
tactccctgtatgcagctgtcagtgttgggctgcaaaccagtgacatcactgagtacctc
aggaagctcagcaagactggagtccctgatggaattatgcaatttattaagttgtgtact
gtcagctatggaaaagtcaaactggtcttgaagcacaacagatactttgttgaaagctcc
catcctgatgtaatccagcatcttctccaagacccggtgatccgagaatgccgcctaaga
aactctgaaggagaggccactgagctcatcacagagactttcacaagcaaatctgctatt
tctaagactgctgaagtcagtggtgggccctccacttcccgagtgacagatccacagggc
aaatctgacatccccatggacctgtttgacttctatgaacaaatggacaaggatgaggaa
gaagaagaagagacacagacggtatcttttgaagtcaagcaggagatgattgaggaactg
cagaaacgttgcatccacctggagtaccctttgttggcagaatatgacttccggaatgat
tctgtcaaccctgatattaacattgacctaaagcccacagctgtcctcagaccctatcag
gagaagagcttgcgaaagatgtttggaaacgggcgtgcacgttcgggggtcattgttctt
ccctgtggtgctggaaagtccctggttggtgtgactgctgcatgcactgtcagaaaacgc
tgtttggtgctgggcaactcagctgtttctgtggagcagtggaaagcccagttcaagatg
tggtccaccattgacgacagccagatctgccggttcacctctgatgccaaggacaagccc
attggctgctccgttgccattagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggccgagcgagtcatggagtggctcaagacccaggagtggggcctcatgatcctg
gacgaagtgcacactataccagccaagatgttccgaagggtgctcaccatcgtgcaggcc
cactgtaagctgggtttgactgcaaccctcgtccgggaagatgacaaaattgtggactta
aattttctgattgggcctaagctctacgaagccaactggatggagctgcagaataatggc
tacatcgccaaagtccagtgtgctgaggtttggtgccctatgtctcctgaattttaccgg
gaatatgtggcaatcaaaaccaagaaacgaatcttgctgtacaccatgaaccccaacaaa
tttagagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaatgtgtttgccctgaaggaatatgccattcgactgaacaaaccctatatc
tacggacctacatctcagggggaaaggatgcaaattctccagaatttcaagcacaacccg
aaaattaatactatcttcatatccaaggtaggtgacacatcgtttgatctgccagaagca
aatgttctcattcagatctcatcccatggtggctccagacgtcaggaagcccaaaggcta
gggcgggtgcttcgagctaaaaaagggatggttgcagaggagtacaatgcctttttctac
tcactggtatcccaggacacacaggaaatggcttactcaaccaagcggcagagattcttg
gtagatcaaggttatagcttcaaggtgatcacgaagcttgctggcatggaggaggaagac
ttggcattttcgacaaaagaagagcagcagcagctcttacagaaagtcctggcagccact
gacctggatgctgaggaggaggtggtggctggggaatttggctccagatctagccaggca
tctcggcgctttggcaccatgagctccatgtccggggccgacgacactgtgtacatggaa
taccactcatcacggagcaaggcgcccagcaaacatgtgcacccgcttttcaagcgcttc
aggaaatga
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integrated database retrieval system
