Cebus imitator (Panamanian white-faced capuchin): 108298784
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Entry
108298784 CDS
T08783
Symbol
ATXN1
Name
(RefSeq) ataxin-1 isoform X1
KO
K23616
ataxin 1/1L
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04330
Notch signaling pathway
cimi05017
Spinocerebellar ataxia
cimi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108298784 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
108298784 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
108298784 (ATXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Pdase_C33_assoc
Motif
Other DBs
NCBI-GeneID:
108298784
NCBI-ProteinID:
XP_017376851
Ensembl:
ENSCCAG00000018590
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRSSEEKAPALPSDNHRVEGAAWLPGNPGGRGPAGGRH
GPAGTSAELGLQQGIGLHKALSTGLDYSPPSAPRSVPVATTLPAAYATPQPGTPVSPVQY
AHLPHTFQFIGSSQYSGTYASFIPSQLIPPTANPVTSAVASAAGATTPSQRSQLEAYSTL
LANMGSLSQAPGHKAEQQPQQPPPPQQHLSRAPGLISPGSPPPAQQSQYVHISSSPQSTG
RTASPPAIPIHLHPHQTMIPHTLTLGPPSQVVMQYADSGSHFVPREATKKAESSRLQQAI
QAKEVLNGEMEKGRRYGAPSSADLGLGKAGGKSVPHPYESRHVVVHPSPSDYSSRDPSGV
RASVMVLPNSSTPAADLEVQQATHREASPSTLNDKSGLHLGKPGHRSYALSPHTVIQTTH
SASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSTD
MEASGAAPAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQ
SVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERI
EDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSV
GDVCISLTLKNLKNGSVKKGQPVDPASVLLKHSKADGLAGSRHRYAEQENGIHQGSAQML
SENGELKFPEKMGLPAAPFLTKIEPSKPPATRKRRWSAPESRKLEKSEDEPPLTLPKPSL
IPQEVKICIEGRSNVEQLPHAGFHFCFTSAVMSPGCRGGQGSPCCHGSTWGKGVWGWGRG
ESEHPRWFLCSVRKTNQVTALTSLPRGRCKLPFRESNGSSSR
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggtccagcgaggagaaggcccccgccctgcccagcgacaaccaccgggtg
gagggcgcagcatggctgccgggcaaccctggtggccggggccccgcgggcgggaggcac
gggccagccggaacctcggcggagcttggtttacaacagggaataggtttacacaaagca
ttgtccacagggctggactactccccgcccagcgcgcccaggtctgtccccgtggccacc
acgctgcccgccgcgtatgccaccccacagccagggaccccggtgtctcccgtgcagtac
gctcacctgccgcacaccttccagttcattgggtcctcccagtacagtgggacctacgcc
agcttcatcccgtcacagctgatccccccaaccgccaaccccgtcaccagtgcagtggcc
tcggccgcaggggccaccactccatcccagcgctcccagctggaggcctattccactctg
ttggccaacatgggcagtctgagccaggcgccgggacacaaggctgagcagcagccgcag
cagccgccaccgccgcagcagcacctcagcagggctccggggctcatcagcccggggtcc
cccccacccgcccagcagagccagtacgtccacatttccagttctccgcagagcaccggc
cgcaccgcctctcctccagccatccccatccacctccacccccatcagacgatgatccca
cacacgctcaccctggggcccccctcccaggtcgtcatgcaatacgccgactccggcagc
cactttgtccctcgggaggccaccaagaaagccgagagcagccggcttcagcaggccatc
caggccaaggaggtcctgaacggtgagatggagaagggccggcggtatggggccccatcc
tcggccgacctgggcctgggcaaggcgggtggcaagtcggtccctcacccgtacgagtcc
aggcacgtggtggtccacccgagcccctccgactacagcagtcgcgacccctcgggggtc
cgggcctctgtcatggtcctgcccaacagcagcacgccagcagccgacctggaggtgcag
caggccactcatcgcgaggcctccccctccaccctcaacgacaaaagcggcctgcactta
gggaagccgggccaccggtcctacgcgctctcaccccacacggtcattcagaccacacac
agtgcttcagagccactcccggtgggactgccagccacagccttctacgcggggactcaa
ccccctgtcatcggctacctgagcggccagcagcaagcgatcacctacgccggcagcctg
ccccagcacctggtgatccccggcacacaacccctgctcatcccagttggcagcactgac
atggaagcgtcgggggcagctcccgccatcgtcacgtcgtccccccagtttgctgcagtg
cctcacacgttcgtcaccaccgcccttcccaagagcgagaacttcaacccggaggccctg
gtcacccaggccgcctaccctgccatggtgcaggcccagatccacctgcccgtggtgcag
tccgtggcctcccccgcggcggctccgcccacgctgcctccctacttcatgaaaggctcc
atcatccagttggccaacggggagctgaagaaggtagaagacttaaaaacagaagatttc
atccagagcgcagagataagcaacgacctgaagatcgactccagcacggtggagaggatc
gaagacagccatagtccgggcgtggccgtgatacagttcgccgtcggggagcaccgagcc
caggtcagcgttgaagttttggtagagtaccctttttttgtgtttggacagggctggtct
tcctgctgtccggagagaaccagccagctctttgatttgccgtgctccaaactctcagtt
ggggatgtctgcatctcgcttaccctcaagaacctgaagaacggctctgttaaaaagggc
cagcccgtggatcccgccagcgtcctgctgaagcactcaaaggccgacggcctggcgggc
agcagacacaggtatgccgagcaggaaaacggaatccaccaggggagtgcccagatgctg
tctgagaatggcgaactgaagtttccagagaaaatgggattgcccgcagcacccttcctc
accaaaattgaacccagcaagcctccggccacgaggaagaggaggtggtcggcgccggag
agccgcaaactggagaagtcagaagacgaaccaccattgactcttcctaagccttctcta
attcctcaggaggttaagatttgcattgaaggccggtctaatgtagagcaactgccacat
gcgggatttcatttctgctttactagtgcagtgatgtcaccagggtgtcgtggtggacag
ggaagcccctgctgtcatggctccacgtggggtaagggggtttgggggtgggggcgggga
gagagtgaacacccacgctggtttctgtgcagtgttaggaaaaccaatcaggttactgca
ctgacttcactcccaagaggtagatgcaaactgcccttccgtgagagcaacggaagctct
tcacgatga
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