Cebus imitator (Panamanian white-faced capuchin): 108300426
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Entry
108300426 CDS
T08783
Symbol
PRPF40A
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108300426 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108300426 (PRPF40A)
Spliceosome [BR:
cimi03041
]
Complex A
U1 snRNP components
U1 related factors
108300426 (PRPF40A)
Complex B
108300426 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
108300426
NCBI-ProteinID:
XP_037592516
Ensembl:
ENSCCAG00000034856
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MQATSSEAEAGGESPQSCVSAAHSDWTAGKPVSLLAPLIPPRSAGQPLTFSPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSQGPGDGERRLSGSSLCSG
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMSQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVV
AAAAAAAAAAAAANANASTSTSNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQ
LTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFK
ELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYK
EAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKE
QAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICF
EEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTIS
SDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVA
IISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPI
ELDAVWEDIRERFVXXPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH
HRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRH
KSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaacgtcgagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gcggcgcattctgattggacagcggggaagcctgtcagcctgttggccccgctgatcccg
ccccgtagcgcagggcagcctttaacctttagccccagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccagggacgggagctgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcagggtcctggggacggggagcggagattgtccggctccagcctctgctccggc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgagtcagagagcaaatatgcctcctgtacct
cacggaatgatgccgcagatgatgccccctatgggaggaccaccaatgggacaaatgcct
ggaatgatgtcgtccgtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaatagtatggatgtagcagcaggtacagcatctggt
gcaaaatctatgtggactgagcataaatcacctgatggaaggacttattactacaacact
gaaaccaaacagtctacctgggagaaaccagatgatcttaaaacacctgctgagcaactc
ttatctaaatgcccctggaaggaatacaaatcagactctggaaagccttactattataat
tctcaaacaaaagaatctcgctgggccaaacctaaagaacttgaggatctcgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaagcaagaagaatgcaccacaacatcaacagccccagtccctaca
acagaaattccgacgacaatgagcaccatggctgccgcagaagcagcagctgctgttgtt
gcagcagcagcagcagcagcagcagctgctgctgctgccaatgctaatgcttccacttct
acttctaatactgtcagtggaactgttccagttgttcctgagccagaagttacttccatt
gttgctactgttgtagataatgagaatacagtaactatttcaactgaggaacaagcacaa
cttactagtacccctgctattcaggatcaaagtgtggaagtatccagtaatactggagaa
gaaacatctaagcaagaaactgtagctgattttactcccaaaaaagaagaggaggagagc
caaccagcaaagaaaacatatacttggaatacaaaggaggaggcaaagcaagcttttaaa
gaattattgaaagaaaagcgggtaccatcgaatgcttcatgggagcaagctatgaaaatg
attattaatgatccacgatacagtgctttggcaaagttaagtgaaaaaaagcaagccttt
aatgcctataaagtccagacagagaaagaagaaaaagaagaagcaagatcaaagtacaaa
gaggctaaagagtcctttcagcgttttcttgaaaatcatgaaaaaatgacttccacaacc
agatacaaaaaagcagagcaaatgtttggagagatggaagtttggaatgcaatatcagaa
cgtgatcgtcttgaaatctatgaagatgttttgttctttctttcaaaaaaggaaaaggaa
caagcaaagcagttgcgaaagagaaactgggaagccttaaaaaacatacttgacaacatg
gctaatgtaacatactctaccacttggtctgaagcccagcagtatctgatggataatcca
acttttgcagaagatgaggagttacaaaacatggacaaagaagatgcattaatttgcttt
gaagaacacattcgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgctg
agagaaaggagacgacagcgaaaaaatcgggaatccttccagatatttttagatgaatta
catgaacatggacaactacattctatgtcatcttggatggaattgtatccaactattagt
tctgacattagattcactaatatgcttggtcagcctggatcaactgcacttgatcttttc
aagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagataataaaagac
attctaaaggataaaggatttgtagttgaagtaaataccacttttgaagatttcgtggca
ataattagttcaactaaaagatcaactacattagatgctggaaatatcaaattggctttc
aatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagaagaggctcgg
aagatgaaacgaaaagaatctgcatttaagagtatgttaaaacaagctgctcctccaata
gaattggatgctgtctgggaagatatccgtgagagatttgtannaangccagcatttgag
gacataactctagaatctgaaagaaagcgaatatttaaagattttatgcatgtgcttgag
catgaatgtcagcatcatcattcaaagaacaagaaacattctaagaaatctaaaaaacat
cataggaaacgttctcgctctcgatcggggtcagattcagatgatgatgatagccattca
aagaagaaaagacaacggtcagagtctcgttctgcttcagaacattcttctagtgcagag
tctgagagaagttataaaaagtcaaaaaagcataagaagaaaagtaagaaaaggagacat
aaatctgactctccagaatccgatgctgagcgagagaaggataaaaaagaaaaagatcgg
gaaagcgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcgcctaagaaa
aagactggaaaggattctggtaattgggatacttctggcagtgaactgagtgaaggggaa
ttggaaaagcgcagaagaacccttttggagcaactggatgatgatcaataa
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integrated database retrieval system
