Cebus imitator (Panamanian white-faced capuchin): 108300486
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Entry
108300486 CDS
T08783
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108300486 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108300486 (DDX6)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108300486 (DDX6)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108300486 (DDX6)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108300486 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
108300486 (DDX6)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108300486 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
Motif
Other DBs
NCBI-GeneID:
108300486
NCBI-ProteinID:
XP_037592708
Ensembl:
ENSCCAG00000021636
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQVSIKLELNSEQNRRRGIQMAAFYLFTRGIDIQAVNVVINFDFPKLAETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVE
DEKP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctgtccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccctggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaacaccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tactgtttgaaaagggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcccattgctttatctggtagggatatcttagctagagca
aaaaatggaacaggcaagagcggtgcctacctcattcccttacttgaacggctagacctg
aagaaggacaatatacaagcaatggtgattgttcccactagagaacttgctctacaggtc
agtcaaatttgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccacc
ggaggaaccaatttacgagatgacataatgaggcttgatgatacagtgcacgtggtgatt
gctacccctgggagaatcctggatcttattaagaaaggagtagcaaaggttgatcatgtc
cagatgatagtattggatgaggcagataagttgctgtcacaggattttgtgcagataatg
gaggatattattctcacgctacctaaaaacaggcagattttactatattccgctactttc
cctcttagtgtacagaagttcatgaattcccatttgcagaaaccctatgagattaacctg
atggaggaactaactctcaaaggagtaacccagtactacgcatatgtaactgagcgccaa
aaagtacactgcctcaacacacttttctccaggcttcagataaaccagtcgatcattttc
tgtaactcctctcagcgagttgaattgctagccaagaagatttctcaactgggttattct
tgcttctatattcatgctaaaatgaggcaggtgagtataaaactagaacttaattctgaa
cagaacaggaggagaggaatccagatggcggccttttatctgtttacccgaggtattgat
atacaagctgtgaatgtggtaataaactttgatttcccaaagctggcagagacctatctc
catcgtattggaagatcaggtcgctttggtcatcttggcttagccatcaacttgatcaca
tatgatgatcgcttcaacctgaaaagtattgaggagcagctgggaacagaaattaaacct
attccaagcaacattgacaagagcctgtatgtggcagaataccacagcgagccagtagaa
gatgagaaaccttaa
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