Cebus imitator (Panamanian white-faced capuchin): 108300901
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Entry
108300901 CDS
T08783
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04613
Neutrophil extracellular trap formation
cimi05014
Amyotrophic lateral sclerosis
cimi05034
Alcoholism
cimi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
108300901 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
108300901 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108300901 (HDAC6)
09165 Substance dependence
05034 Alcoholism
108300901 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cimi01009
]
108300901 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108300901 (HDAC6)
04131 Membrane trafficking [BR:
cimi04131
]
108300901 (HDAC6)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108300901 (HDAC6)
Enzymes [BR:
cimi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108300901 (HDAC6)
Protein phosphatases and associated proteins [BR:
cimi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108300901 (HDAC6)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108300901 (HDAC6)
Membrane trafficking [BR:
cimi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108300901 (HDAC6)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108300901 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108300901
NCBI-ProteinID:
XP_017379368
Ensembl:
ENSCCAG00000037521
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MEKKGPGARVPTGRQELGGASQGRSLRKGLRPNRDRGEASSAMTSTGQDSTTTRQRRSRQ
NPQSSPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAIEEDLIVGLQGMDLNL
EAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMKEGELRVLADTYDSVYLHPNSYSCACLATGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKL
ILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL
VRSTDTVEGDNVEEDNVEESEDEGPWEPPVLPILTWPVLQFRTGLVYDQSMMNHCNLWDS
HHPEVPQRILRIMCRLEELGLAGRCLTLPPRPATEAELFTCHSAEYVARLRATEKMKTRE
LHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGT
FFPMGDEGASSQIGRAAGTGFTVNVAWNGPRIGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACIRSL
LGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLWVMKVEDKEGPSSSKLITKKAPQP
AKPTLAERMLTREKKVLEASMGKVISVSGKESTPDQIKSETAVVAVTQDQSSEAATGGAT
LAQTISKAAIGGAMLGQTTSEEAVGGATPDQTTSEETVGGATLDQTTSEDAVRGTTLGQT
TSEAVGGATLAQTTSETAMEGATLDKTTSEEALGGTKLIQTPLTLSTDHQTPPTSPVRGT
TSHISPSTLIGSLRTLELGSESQGAPESQAPGEENLLGEAAGGQDMADSMLMQGSKGLTD
QAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYINAH
MLQHHGNSGHPLVLSYVDLSTWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPHPY
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaaggcccgggcgctcgcgtccccacgggtcgccaagaacttggcggagcg
agccaagggcggagtttgagaaaggggttgcgcccaaaccgagacaggggcgaagcctcc
tcagctatgacctcaaccggccaggattccaccacaaccaggcagcgaagaagtaggcag
aacccccagtcgtcccctcaggactccagtgtcacttcgaagcgaaacattaaaaaggga
gccgttccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaag
ctcggccaagcaatcgaagaagacctaatcgtgggactgcaggggatggatctgaacctt
gaggctgaagcactggctggcactggcttggtgttggatgagcagctaaatgaattccat
tgcctctgggatgacagcttcccggaaggccctgagcggctccatgccatcaaggagcaa
ctgatccaggagggcctcctagatcgatgtgtatcctttcaggcccggtttgctgaaaag
gaagagctgatgttggttcacagcctagaatatattgatctgatggaaacaacccagtac
atgaaggagggagaactccgcgtcctagcagacacctatgactcagtttatcttcatccg
aactcatactcctgtgcctgcctggccactggctctgtcctcaggctggtggatgcggtc
ctaggggctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccaa
cacagtcttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgct
caacagaaacaccgcatccggagggtccttatcgtggattgggatgtgcaccacggtcaa
ggaacacagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctac
gagcagggtaggttctggccccacctgaaggcctctaactggtccaccacaggttttggc
caaggccaaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgac
tacattgctgctttcctgcacgtcctgctgccagtcgcccttgagttccagcctcagctg
gtcctggtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgcc
actccagcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgtgccctggctgaaggcgtcagtgcttca
cttcacacccttctgggagatccttgccccatgctggagtctcctggtgccccctgccgg
agtgcccaggcttcagtttcctgtgctctggaagcccttgagcccttctgggaggttctt
gtgagatcaactgatactgtggaaggggacaatgtggaggaggacaatgtagaggagagc
gaagatgaaggaccctgggaacccccagtgcttccaatcctgacatggccggtgctacag
tttcgcacagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagc
caccaccctgaggtaccccagcgcattttgcggatcatgtgccgtctggaggagctggga
cttgccgggcgctgcctcaccctgccaccacgccctgccacagaggctgaactgttcacc
tgccacagtgctgagtatgtagctcgtctccgggccacagagaagatgaaaacccgggag
cttcaccgggagagttccaactttgactccatctacatctgccccagcacatttgcctgt
gcacagcttgccactggcgctgcctgccgcctggtggaggctgtgctctcaggagaggtt
ctgaatggtgctgctgtggtgcgtcccccaggacaccatgcggagcaggacgcagcttgc
ggtttttgctttttcaactcagtggctgtggctgctcgccatgcccaggctatcagtggg
catgccctgcggatcctgatcgtggattgggatgtccaccatggtaatggaactcagcac
atgtttgaggatgaccccagtgtactatatgtgtccctgcaccgctacgatcatggcacc
ttcttccccatgggagatgagggtgccagcagccagattggccgggctgcgggcacaggc
ttcaccgtcaacgtggcatggaatgggccccgcataggtgatgctgactacctagctgcc
tggcatcgcctggtgcttcctattgcctacgagttcaacccagaactggtgctggtctca
gctggctttgacgctgcacggggggacccgctggggggctgccaggtatcacctgagggt
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttatccta
gagggcggctataacctgacatccatctcagagtccatggctgcctgcattcgctccctc
cttggagacccgccacccctgctgaccctgccacggcccccactatcaggggccctggcc
tcaatcactgagaccatccaagtccatcgcagatactggcgcagcttatgggtcatgaag
gtagaagacaaagagggaccctccagttctaagctgatcaccaagaaggcaccccaacca
gccaaacctacgttagctgagcggatgctcacacgagaaaagaaggttctggaagcaagc
atggggaaggtcatctcggtgtctgggaaagagtccactccagaccagattaagtcagag
acagctgtggtggcagtcactcaggaccagtcctcagaagcagccacggggggagccaca
ctggcccagaccatctccaaggcagccattgggggagccatgctgggccagaccacctca
gaggaggctgtcgggggagccactccggaccagaccacctcagaggaaactgtgggagga
gccactctggaccagaccacctcagaggatgctgttaggggaaccactctgggccagact
acctcagaggctgtaggaggagctacactggcccagaccacctcagagacagccatggag
ggagccacactggacaagactacgtcagaggaagctctagggggcaccaagctgatccaa
actcctctaaccttgagcacagaccaccagacgcccccaacctcacctgtgcggggaact
acatcccatatatctcccagtacactgattgggagtctcaggaccttggagctgggcagc
gaatctcagggggccccagaatctcaagcaccaggagaggagaacctactaggagaggca
gctggaggtcaggacatggctgattcgatgctgatgcagggatctaagggcctcactgat
caggccatattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgt
cccatacctgcagcaggcctggatgtgacccaaccttgtggggactgtggaacaatccaa
gagaattgggtgtgtctctcttgttatcaggtctactgtggtcgttacatcaatgcccac
atgctccaacaccatggaaactctggacacccgctggtcctcagctatgtcgacctgtcg
acctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaac
atcgcccaccagaacaagtttggggaggatatgccccacccatactaa
DBGET
integrated database retrieval system
