Cebus imitator (Panamanian white-faced capuchin): 108301257
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Entry
108301257 CDS
T08783
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108301257 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108301257 (SMG7)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108301257 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
108301257 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
108301257
NCBI-ProteinID:
XP_017379850
Ensembl:
ENSCCAG00000028596
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNESQEESYNTYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQESSV
IESLAADGSPGLKSVLSTSRNLSNNCDTGEKPMVTFKENIKPREVNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPTQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQP
TAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYW
DSSYSMADNRSVMAQQANMDRRGKRQTVFRPEQDPVPRMPFEDPKSSPLLPPDLLKSLAA
LEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQE
RYPNNSMFNEVYGKNLAPSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPASQ
SPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLS
ATSSSESSWHQASTPSATWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQ
KQKQQRGQGTMNPPH
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcc
cagatgaggaccgaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcacgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaatccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtatttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctccaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctgcaaaaagcactttct
aaagcactggaaagccgagatgaggtgaaaaccaagtggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacggagcagcatagttacagccaagatgaacagctatgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaatgagtct
caggaggagtcctacaacacctaccctcttccagcagtcaaggtctccatggactggcta
agactcagacccagggtcttccaggaggcagtggtggatgaaaggcagtacatttggccc
tggctgatttctcttctgaatagcttccatccccatgaagaggacctctcaagtactaat
gcaacaccacttccagaggagtttgaattgcaaggattcttggcgttgagaccttctttc
aggaacttggatttttccaaaggtcaccagggtattacaggagacaaagaaggtcagcaa
cgacgaatacgacagcagcgcttgatctctataggcaaatggatcgctgataatcagcca
aggttgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaattccagaa
ttaatactggaagaccccagtgaagccaaagagaaccttattctgcaagaatcatctgtg
atagagtcgctggctgcagatgggagcccagggctgaagtcagtgctatctacaagccga
aatttaagcaacaactgtgacacaggagagaagccaatggttaccttcaaagagaacatt
aagccacgagaagtgaacagagaccagggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaactgaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagccagaaaa
acaccggtaactcaaactccaactcaagcaagtaactcccagttcatccccattcatcac
cctggagccttccctcctcttcccagcaggccagggtttccgcccccaacatatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccag
ggacctcaacaatcacagccaccttcccagcaaccccttacatctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaagctctaactcagcaacaacaatcccct
acaaaagctgtgccagctttggggaaaagcccgcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaattatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgttt
gagccgtcattgcaacctcctgtaatgcagcagcagcctctagaaaaaaaaatgaagcct
tttcccatggagccatataaccataatccctcagaagtcaaggtcccggaattctactgg
gattcttcctacagcatggctgataacagatctgtaatggcacagcaagcaaatatggac
cgcaggggcaaacggcaaacagtcttccgtccagagcaggatcctgtgcccaggatgccg
tttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggctgcc
ttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctactg
gggcctctcgcctctcttcctggacgaagcctttttaaatccttattggagaagccctca
gagctcatgtcacattcatcctctttcctgtccctcaccggattctctctcaatcaggaa
agatacccaaataatagtatgttcaatgaggtatacgggaagaacctggcacccagctcc
aaagcagaactcaatccctcaatggctccccaggaaacatctctgtattccctttttgaa
ggaactccgtggtctccatcacttcctgccagttcagaccattcaacaccagccagccag
tctcctcattcctctaacccaagcagtctgcccagctctcctccaactcacaaccataat
tctgttccattctccaattttggacccattgggactccagataacagggataggaggact
gcggatcggtggaaaactgataagccagccatgggtgggtttggcattgattatctctca
gcaacatcttcctctgagagcagttggcatcaggccagtactccaagtgccacctggaca
ggccatggcccctccatggaggattcttctgctgtcctcatggaaagcctaaagtctatc
tggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcagcag
aagcagaaacagcaacggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
