Cebus imitator (Panamanian white-faced capuchin): 108301376
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Entry
108301376 CDS
T08783
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03013
Nucleocytoplasmic transport
cimi05014
Amyotrophic lateral sclerosis
cimi05200
Pathways in cancer
cimi05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108301376 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108301376 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
108301376 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108301376 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108301376 (TPR)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108301376 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
YwqH-like
Imm70
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
108301376
NCBI-ProteinID:
XP_017380022
Ensembl:
ENSCCAG00000034100
LinkDB
All DBs
Position
Unknown
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRPRGRPMASRGFDGSRRGSLRRAGAREPPSEVIEAAAQASGSSWSPPFFS
ASTPSATATGAPGPADMAAVLQQVLERAELSKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKTVTEKNKELEIAQD
RNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKESNATKGELQL
KLDELQASDVSVKFREKRLEQEKELLQNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLE
KIGKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLE
NALTELEQLRKSRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASGLDDISLASTPKR
PSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNEQLEKLQEQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDAKRQLDAET
NLHLNTKELLKNAQKEIVTLKQHLSNMEVQLASQSSQRTGKGQPNNKEDVDDLVSQLRQA
EEQVNDLKERLRTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCVCRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQTQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVLETSAQSSGDHQEQHVSVQEMQELKETLN
QAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRITALKS
QYEGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASISDP
PTANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHP
QIEPANQELSPSIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDNTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GEGNQRAADSQNSGEGNTGAAESSFTQEVSREQQPSSASERQAPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaagccgcccaagaggacgacccatggcatcccgg
ggctttgacgggtcccgccgcgggagtctccggcgggctggcgcgcgcgagccgccgagc
gaggtgatagaggcggcggcgcaggcgtctgggtcctcctggtctccgcctttcttctcc
gcttctaccccgtcagccactgccactggggctcctggccccgccgacatggcggcggtg
ttgcagcaagtcctggagcgcgcagagctaagcaagctgcccaagtccgtccagaacaaa
cttgaaaagttccttgctgatcagcagtccgagatcgatggcctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtattttgagatagaaaagagactgtcccacagt
caagagagacttgtgaatgaaacccgagagtgtcagagcttgcggcttgagctagagaaa
ctcaatagtcaactgaagacagtaactgagaaaaacaaagaacttgaaattgctcaggat
cgcaatatcgccattcagagccaatttacaagaacaaaggaagaattagaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatacttaacagaggat
gttaaacgtctaaacgaaaaacttaaagaaagcaatgcaacaaagggtgaacttcagtta
aaattggatgaacttcaagcttctgatgtttctgttaagtttcgagaaaaacgcttggaa
caagaaaaggaattgctacaaaatcagaatacatggctgaatacagagttgaaaaccaaa
actgatgaacttttggctcttggaagagaaaaaggaaatgagattctagagcttaaatgt
aatcttgaaaataaaaaagaggaggtttctagactggaagaacagatgaatggcttaaaa
acatcaaatgagcatcttcaaaagcatgtggaggatctgttgaccaaattaaaagaggcc
aaggagcaacaagccagtatggaagagaaattccataacgaattaaatgcacacataaaa
ctttctaacttgtacaagagtgccgctgatgactcagaagcaaagagcaatgaactaacc
cgggcagtggatgaactacacaaacttttgaaagaagctggtgaagccaacaaagcaata
caagatcatcttctagaggtagaggaatctaaagatcaaatggaaaaagaaatgcttgag
aaaatagggaaattggagaaggaattagagaatgcaaatgaccttctttctgccacaaaa
cgtaaaggagccatattatctgaagaagagcttgcagccatgtctcctactgcagcagct
gtagctaagatagtgaaacctgggatgaaattaacggagctctataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaacaaaagaattaataagtacctagat
gaaatagtgaaagaagtggaagccaaagcaccaattttgaaacgccagcgtgaagaatat
gaacgagcacagaaagctgtagcaagtttatctgttaagcttgagcaagctatgaaggag
attcagcgattgcaggaagacactgataaagccaacaaacattcatctgtacttgagaga
gacaatcaaagaatggaaatacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagcaagaggcaaccatgtaattcgtgacgaggaagtaagctctgct
gatataagtagttcatctgaggtaatatcacagcatctagtatcttatagaaatattgaa
gagcttcaacaacaaaatcaacgtcttttggtggcccttagagagcttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatcactgagcttcagcttaaacttgag
aatgccctcaccgaactagaacaactccgcaaatcacgacagcatcaaatgcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttattgtcacaaacaacaggagtt
gccattccattacaagcttcaggcttagatgatatttctcttgcatcaactccaaaacgt
ccaagtacatcacagactgtttccactcctgctccagtacctgttattgagtcaacagag
gccatagaggctaaggctgccctgaaacagttgcaggaaatttttgagaactacaaaaaa
gaaaaagcagaaaatgaaaaaatacaaaatgaacagcttgagaaacttcaagagcaagtt
acagatttgcggtcacaaaataccaaaatttccacccagctagactttgcttctaaacgt
tatgaaatgctgcaagataatgttgaaggatatcgtcgagaaataacatctcttcaggag
agaaatcagaagctcactgcaacgactcaaaagcaagaacagattatcaatacaatgact
caggatttgagaggagcaaatgagaagctagctgtcgcagaagtaagagcagaaaatttg
aagaaggaaaaggaaatgcttaaattgtccgaagttcgtctttctcagcagagagagtct
ttgttagctgaacaaaggggacaaaacttgctgcttactaatctgcaaacaattcaggga
atactggagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaattg
gaacatgagatctctcacctaaagaagaagttggaaaatgaggtggaacaaaggcataca
cttacaagaaatctagatgttcagcttttagatgcaaagagacaactggatgcagagaca
aatcttcatcttaacacgaaagaactgttaaaaaatgcacaaaaggagattgttacattg
aaacagcacctcagtaatatggaagtccaacttgcatctcagtcttcacagagaactggt
aaaggtcagcctaacaacaaagaagatgtggatgatcttgtgagtcaactaagacaggcg
gaagagcaggtgaatgacttaaaggagagactcagaacaagtactagtaatgtggaacaa
tatcgagcaatggttaccagtttagaagaatccctgaacaaggaaaaacaggtaacagaa
gaagtacgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacaattg
gaaaagaagctaatggaagtagagaaggagaaacaagaacttcaggatgataagagaaga
gccatagagagcatggaacaacagttatctgaattgaagaaaacactttctagtgttcag
aatgaagtacaagaagcccttcagagagcaagcacagctttaagtaatgagcagcaagcc
agacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagaga
gaattgatgctgcatgctgctgatgttgaagctctacaagctgcgaaggaacaggtttca
aaaatggcctcagtgcgtcagcatttggaagagacaacccagaaagcagaatcacagtta
ttggagtgcaaagcgtcttgggaggaaagagaaagaatgttaaaggatgaggtttccaaa
tgtgtatgtcgctgtgaagatctggagaaacaaaacagattacttcatgatcagattgaa
aaattaagtgacaaggtcgttgcctctgtgaaggaaggtgtgcaaggtccactgaatgta
tctctcagtgaagaaggaaaatctcaagaacaaattttggaaattctcagatttatacgg
cgagaaaaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctgcgttat
cgacaaagggttgaacttttagaaagagagctgcaggaactgcaagatagtctaaatgct
gaaagggagaaagtccaggtaactgcaaagacaatggctcagcatgaagaactgatgaag
aaaactgaaacaatgaacgtagttatggagaccaataaaatgctgagagaagaaaaagag
agattagaacaggatctacagcaaacgcaagcaaaggtgaggaaactggagttagatatt
ttgcccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgctacaggcagag
aagaagctgttagaagaggatgtcaaacgttggaaagcacgtaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtattcaacagttgacagaagaaattgggagacttaaagctgaaattgcaaga
tcaaatgcatctttgactaacaaccagaacttaattcagagcctgaaggaagatctgaat
aaagtaagaactgaaaaagaaaacatccagaaggacttagatgccaaaataattgatatc
caagaaaaagtcaaaactattactcaagtaaagaaaattggacgtaggtacaagactcag
tatgaagaacttaaagcacaacaggataaggttttggagacatcagctcaatcctctgga
gaccatcaggaacagcatgtttcagtccaggagatgcaggagctcaaagaaacgctcaac
caagctgaaacaaaatcaaaatcactcgagagtcaagtagagaatctgcagaagacatta
tctgaaaaagagacagaagcaagaaatcttcaggaacagactgtgcagcttcagtctgaa
ctttcacgacttcgtcaggatcttcaagataggaccacacaggaggagcagctccgacaa
cagataactgaaaaggaagaaaaaacaagaaaggctattgtagcagcaaaatcaaaaatt
gcacacttagctggtgtaaaagatcagctaacgaaagaaaatgaggagctaaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgtattactgctctaaagtcc
caatatgaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacac
cttgagcagagagatgagcctcaagaacctactaataaggtccctgaacagcagagacag
atcacgctgaaaacaactccagcttctggtgaaagaggaattgccagcatatcagatcca
ccaacagccaatataaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gcaatggctggaaataagtcaacgcccagggcaagtatccgcccaatggttacacctgca
actgttacaaatcccactactactccaacagctacagtgatgcccactacacaagtggaa
tcacaggaagctatgcagtcagaaggccctgtggaacatgttccagtttttggaagcaca
agtggatctgttcgttctactagtcctaatgtccagccttctatctctcaacctatttta
actgtccagcagcaaacacaggctacagcatttgtgcaacccacccaacagagtcatcct
cagattgagcctgccaatcaagagttatctccaagcatagtagaggttgttcagagttca
ccagttgagcgtccttctacttccacagcagtatttggcacagtttcggctaccccaagt
tcttctttgccaaagcgtacacgtgaagaggaagaggataacaccatagaagcatcagac
caagtctctgatgatacagtggaaatgcctcttccaaagaagttgaaaagtgttacacct
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaagtagagactcaa
gtatataaccaggattctcaagattccattggagaaggagttacccagggagattataca
cctatggaagacagtgaagaaacctctcagtctctacaaatagatcttggaccacttcaa
tcagatcagcaaacaacaacttcatcccaggatggtcaaggcaaaggagatgatgtcatt
gtaattgacagtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggac
tacgaagaggatgaggaagatgatgatgatgatgaagatgacacagggatgggagatgag
ggtgaagatagtaatgaaggaactggtagtgccgatggcaatgatggttatgaagctgat
gacgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaggtaatcagagagctgctgattctcaaaacagtggtgaaggaaatacaggtgct
gcagaatcttcttttactcaggaggtttctagagaacaacagccatcctcagcctctgaa
agacaggcccctcgagcacctcaatcaccaaggcgcccaccacatccgcttcccccaaga
ctgaccattcatgctccacctcaggagttgggaccaccagttcagagaattcagatgacc
cgaaggcagtctgtaggacgtgggcttcagctgactccaggaataggtggtatgcaacag
catttttttgatgatgaagacagaacagttccaagtactccaactcttgtggtgccacat
cgtactgatggatttgctgaagcaattcattccccacaggttgctggtgtccctagattc
cggtttgggccacctgaagatatgccacaaacaagttctagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtacgaaacaccactgttcctagctcatgaagaa
gagtcaggtggccgaagcgttcccactactccactgcaagtagcagccccagtgactgta
tttactgagagtaccacctcagatgcttcggagcatgcctctcagtctgttccgatggtg
accacatccactggcactttatctacaacaaatgaaacagcagcaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccaacaggaagaagagccggttcaagcatctgatgagtcagatctcccctctaccagc
caggatcctccttccagctcatctgtagatactagtagtagtcaaccaaagcctttcaga
cgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
