Cebus imitator (Panamanian white-faced capuchin): 108301755
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Entry
108301755 CDS
T08783
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X4
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108301755 (TNRC6C)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108301755 (TNRC6C)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108301755 (TNRC6C)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108301755 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
DUF4718
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
108301755
NCBI-ProteinID:
XP_017380497
Ensembl:
ENSCCAG00000030524
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MIIILTLVLFNREKEQETQEEERLMEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTKTC
SSQPQPAGTSTSTSTSTISSSNNGKRASASGQQPAASRYLPREVPPRFRQQEQKQLLKRG
QPLPTGTLTSVSPTQGAGPAGVSPPPLSGAGTQHHPSKLQPDLSHSGLADHYENSHWGQQ
PAYRSEAHCSWDKVIIDRTDKEAWPSITGTETESASECTTDTDSASNCGSENSSMATGSA
QGNFTGHTKKTNGNNGTNGALVQSPSNQSALGAGGANSNGSAARVWGVATGSSSGLAHCS
VSGGDGKMDTMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATGSPSSI
CSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNN
TNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVSGGSAEGISN
SVWGLSPGNPATGNGNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPAGP
GILAWGRGSGNNGVGNIHSGAWGHPSRSTSNGVNGEWGKPPNQHSNSDINGKGSTGWESP
SVSSQNPSVQPSGEHMNSWAKAASSGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGI
IDQGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRPERKNDNGTEAWGCAATQP
SNSGGKNDGSIMNSTNTSSVSGWVNAPPAAVPANTGWGDGNNKAPSGPGVWGDSISSTAV
STAAAAKSGHAWSGAVNQEDKSPTWGEPPKPKSQHWGDGQRSNPAWSAGGGDWADSSSVL
AHLGDGKKNGSGWDADSNRSGSGWNDTTRSGTSGWGSSTNTKVNPGTNWGETLKPGPQQN
WANKPQDNNVSNWGGAASVKQTGTGWIGGPVPVKQKDSSEATGWEEPSPPSIRRKMEIDD
GTSAWGDPSNYNNKTVNMWDRNNPVIQSSTTTNTTTTTTTTSNTTHRVETPPPHQASTQL
NRSPLLGPVSSGWGEMPNVHSKTEHSWGEPSSPSTLVDNGTAAWGKPPSSGSGWGDHPAE
PPMAFGRAGAPVAASALCKPASKSMQEGWGSGGDEMNLSTSQWEDEEGDVWNNAASQEST
SSCSSWGNAPKKGLQKGMKTSGKQDEAWIMSRLIKQLTDMGFPREPAEEALKSNNMNLDQ
AMSALLEKKVDVDKRGLGVTDHNGMATKPLGCRPPISKESSVDRPTFLDKDGGLVEEPTP
SPFLPSPSLKLPLSHSALPSQALGGIASGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTM
QQPPQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTM
LNQLYQLQLAYQRLQIQQQMLQAQRNVSGSMRQQEQQVARTITNLQQQIQQHQRQLAQAL
LVKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGL
NPNMNVTSMDMTSGLSVKDPSQSQSRLPQWTHPNSMDSLPSAASPLEQNPSKHGAIPGGL
SIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNGSSINWPPEFH
PGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPPSSQNATLPSS
SAWPLSASGYSSSFSSIASAPSVAGKLSDIKSTWSSGPASHTQASLSHELWKVPRNTTAP
TRPPPGLTNPKPSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLR
TLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNR
FLAQGQALPPTSSWQSSSASSQPRLSAAGSSHGLVRSDAGHWNAPCLGGKGSSELLWGGV
PQYSSSLWGPPSADDSRVIGSPTPLTTLLPGDLLSGESL
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgatcattatacttacactagttttgtttaatagggagaaagagcaagaaacacaagaa
gaggaacgtttgatggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaa
ggtgctcagaaaaaggctgctgatcaaaaaaccaaagtgccagaacctactaagacctgt
tcaagccagccccaacctgccggtaccagtaccagtacttccaccagcactatctccagc
agcaacaatggcaaacgtgcatctgccagtggccagcagccagctgcatcccgttacctg
cctcgagaggtgcctccacgcttccgccagcaagaacagaagcagctattaaagagaggt
cagccattgcctacggggactctaaccagtgtgagcccaacccagggagctgggcctgca
ggggtaagcccacctcccctatctggagccggaacacagcatcatcccagtaagctccaa
ccagatctcagtcatagtggattggcagatcattatgaaaattcccactggggacagcag
cctgcttacagaagtgaagcccactgcagctgggataaagtgataatagataggacagac
aaggaggcgtggccttccatcacaggaacagagactgaatctgcctcagaatgtactaca
gacactgactctgcctccaactgtggctcagagaacagtagcatggctacagggagtgcc
cagggcaacttcactggacataccaagaagacaaatggcaataatggcaccaatggcgca
ctcgtccaaagcccttctaatcagagtgcccttggagcaggaggagcgaacagtaatgga
agtgcagccagagtgtggggtgtagccacaggctccagctctggcctggctcactgctct
gtcagtggtggggatggaaaaatggacaccatgattggagacgggagaagtcagaattgc
tggggtgcttccaactccaatgctggcattaatctgaaccttaatcctaatgccaaccca
gctgcctggcctgtacttggacatgaaggaaccgtggcgacaggcagcccttccagtatt
tgcagtccagtcagtgccataggtcaaaatatgggcaaccagaacgggaacccaacaggc
actttaggtgcttggggaaacttgctgccgcaagagagcacagaaccacaaacgtccact
tctcagaatgtgtctttcagcgtacaacctcagaaccttaacactgatggaccaaataac
actaaccccatgaactcttcacccaaccctatcaatgcaatgcagacaaatggactgcca
aactggggcatggctgttggtatgggggccatcatcccaccccacctgcaaggccttcct
ggtgctaatggatcatcagtttctcaagtcagtgggggcagtgctgaaggaataagcaat
tctgtgtggggattgtccccaggtaaccctgccacaggaaatggcaattctgggttcagt
caggggaatggagacactgtgaactcagcattaagtgctaaacaaaatggatccagcagt
gctgtgcaaaaggaaggaaatggaggaaatgcttgggattcaggacctcctgctggtcct
ggaatacttgcttggggaaggggcagtggcaacaatggcgttggtaatatccattcagga
gcttggggccaccccagccgaagcacctctaatggtgtgaatggagaatggggaaagccc
ccaaaccagcattccaatagtgacatcaatgggaaaggatcaacagggtgggaaagtcct
agtgtcagcagccagaacccttctgtgcagcctagcggtgaacacatgaactcctgggcc
aaagctgcatcttccggaactacagcaagtgaaggaagtagtgatggttctggcaaccac
aatgaaggaagcactgggagggaaggaacaggagaaggccgaaggcgagataaagggatt
atagaccaagggcatatccagttgccaaggaatgatcttgacccaagagttctgtctaat
actggttggggacagactcctgtaaagcaaaacactgcctgggaatttgaagaatcccct
aggcctgaaaggaaaaatgacaatgggacagaggcctggggttgtgcagctactcagcct
tcaaactcaggggggaagaacgatgggtccatcatgaacagtacaaatacctcttcagta
tctgggtgggtcaatgcgccacctgccgctgtgccagcaaacacaggttggggagacggc
aacaacaaagcgccaagtggcccaggggtttggggggactcgataagctctactgctgtt
agtactgctgctgctgctaagagtggccatgcctggagtggggctgtaaatcaggaggac
aagtcacccacctggggcgagcctccaaagcccaaatcccaacactggggagatggacaa
agatcaaatccagcctggagtgcaggagggggagactgggcagattcatcgtctgtcctg
gcacacttgggggatgggaaaaagaatggatctggatgggatgctgatagtaatagatca
gggtctggttggaatgacaccacgagatctgggaccagcggctggggcagcagcacaaat
acaaaggtcaatccaggtacaaactggggggagactttaaaacctggcccccaacaaaac
tgggctaataaaccccaagacaacaatgtgagtaactggggaggagctgcttctgtgaaa
cagacaggaacagggtggatcggggggccagtaccagtcaaacagaaggacagcagcgag
gcaactggctgggaagaaccctctccaccatccattcgccgcaaaatggaaattgatgat
ggtacctcagcttggggggacccaagcaactataacaataaaactgtaaacatgtgggat
agaaacaacccggtcatccagagcagtaccacgaccaataccaccaccaccaccactacc
acgagcaacaccacacacagggtggagacgccaccaccgcaccaggccagtactcagctg
aatcgatcaccattgctcggtccagtttcatcaggctggggagaaatgcctaatgttcac
tcaaagactgaacactcttggggagaaccatcctccccttctacactggtggacaatggc
acagcagcatgggggaagccacccagcagtggcagtgggtggggagatcaccctgctgag
ccaccgatggcatttggaagagctggcgcacctgttgctgcctcggccctgtgcaaacca
gcttcaaaatctatgcaagaaggctggggcagtggtggggatgaaatgaacctcagtacc
agccagtgggaggatgaagaaggagacgtgtggaataatgctgcttcccaagaaagcacc
tcctcctgcagctcctgggggaatgcccccaaaaaaggacttcaaaagggcatgaagacg
tctggcaagcaggatgaggcctggatcatgagccggctgatcaagcaactcacagacatg
ggcttcccgagagaaccagctgaggaggccttgaagagtaacaatatgaatcttgatcag
gccatgagcgctctgctggaaaagaaggtggacgtggacaagcgtgggctgggagtgacc
gaccataatggaatggccaccaagcccctcggctgccgcccgccaatctccaaagagtct
tccgtggaccgccccacctttcttgacaaggatggcggtctcgtggaagagcccacgcct
tcaccgttcttgccttccccaagcctgaagctccccctttcacacagtgcactccccagt
caggccctgggtgggattgcctccgggctgggcatgcaaaacttgaattcttctagacag
ataccgagtggcaatctgggtatgtttggcaatagtggagcagcacaagccaggaccatg
cagcagccgccacagccaccagtgcagcctcttaactcttcccagcccagtctccgtgct
caagtgcctcagtttctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaa
aatattggtctcaaccctgcactattaacctcgccaattaatcctcagcatatgacgatg
ttgaaccagctctatcagctgcagctggcataccaacgtttacaaatccagcagcagatg
ttacaggcccagcgtaatgtgtctggatccatgagacaacaggagcagcaagttgcgcgc
acaatcactaatctgcagcagcagatccagcagcaccagcgccagctggcccaggccctg
ctcgtgaagcagccaccgccgccgccacccccgccgcacctgtctctgcacccctctgca
ggcaaatcggccatggacagcttcccctcacacccccagactcccggcctacctgacctg
cagaccaaagagcagcagtcttcacccaacacctttgctccttaccctcttgctggactg
aacccaaacatgaatgtcaccagcatggatatgacaagtggcttgtcggtgaaggaccca
tcccagtcccagtcacgcctcccccagtggacgcaccccaactccatggatagcttgccc
agcgccgcttcccccctggagcagaaccctagcaagcatggtgctatccctggaggtcta
agcattgggcctccaggtaagtcctccattgatgactcctatggccggtacgatttaatc
cagaacagtgagtcaccagccagtcctcccgtagctgttccccatagctggtcacgtgcc
aaatctgacagtgataaaatctcaaatggctctagcatcaactggcccccagaattccat
ccaggagttccatggaaaggactgcagaatattgaccctgagaatgaccctgatgtcact
cctggcagtgtccccactgggcctaccatcaataccaccatccaggatgtcaaccgctac
ctcctcaagagtggagggtcctccccgccatcatctcagaatgccacgctgccttcttcg
agtgcctggccactcagtgcctccggctacagtagctctttcagcagcattgcatccgca
cctagtgttgcaggtaaactgtcagacattaaatcaacgtggtcctctggcccggcctcc
cacacacaagcctctctgtctcatgaactgtggaaggtgcccagaaacactactgcaccc
acgaggccacctccagggttaaccaatcccaagccttcctccacctggggtgccagcccc
ctcggctggaccagctcctactcctcgggttctgcctggagcaccgacacctcaggaaga
accagcagctggcttgttcttcgaaacctcactccccagatcgatggctccacactgcgg
acactgtgtttgcaacacgggcctctcatcacattccacctgaacctgactcaaggcaat
gccgtggtccggtacagctccaaggaggaggctgccaaggcccagaagtctctgcacatg
tgcgtcctgggcaacactaccatcctggcggagtttgctggcgaagaagaagtgaatcgc
ttcttagctcaaggccaggcactgccacccacctccagctggcagtccagcagcgcatcc
agccagccgcggctcagcgcagcgggcagctcccatggcctggtgcgcagcgatgctggc
cactggaatgccccgtgcctgggtggcaaggggagcagtgagctgttgtggggcggggtg
ccccagtactccagcagcctgtggggcccgcccagtgccgacgacagcagggtgatcggc
agtcccaccccgctgaccaccttgctgcccggggacctgctcagcggggagtccctgtag
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integrated database retrieval system
