Cebus imitator (Panamanian white-faced capuchin): 108301875
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Entry
108301875 CDS
T08783
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108301875 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cimi03021
]
108301875 (CPSF3)
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108301875 (CPSF3)
Transcription machinery [BR:
cimi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108301875 (CPSF3)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108301875 (CPSF3)
U7-dependent histone pre-mRNA processing factors
108301875 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
108301875
NCBI-ProteinID:
XP_017380688
Ensembl:
ENSCCAG00000036730
UniProt:
A0A2K5SBU7
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCISIKDDSILSVTVDGKTANLNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattattcttgagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctagaaggaatggatgctcttccttatattgatttaattgac
ccagctgagattgatctcctgttaattagtcatttccatttggatcattgtggagctctg
ccctggtttctacagaagacaagcttcaaaggaagaacatttatgactcatgccacaaaa
gctatttatagatggcttctttccgattatgtcaaagttagtaacatatcagcagacgac
atgctgtatactgagacagatttggaagaaagcatggacaaaattgaaactatcaacttt
catgaagttaaggaagttgcaggaatcaagttttggtgttaccacgcaggccacgtccta
ggagccgccatgttcatgatcgagatcgcaggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagataggcacttaatggcagctgaaattcctaatattaagcctgatatt
cttatcattgaatctacttatgggacccatatccatgagaaacgtgaagagcgagaagca
agattctgtaacactgtccacgatatcgtaaacagaggaggcaggggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattctggatgagtactggcagaatcac
ccagaactacatgacattccaatatactatgcgtcatctttggccaagaagtgtatggca
gtataccagacatatgtaaatgccatgaacgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaaacacattagtaacctcaagagcatggatcattttgatgacatt
ggtccgagtgttgtaatggcctccccaggcatgatgcaaagtggcttatccagagagtta
tttgaaagctggtgcactgataagaggaacggcgtcattatagcaggatactgcgtagaa
gggacacttgccaagcacatcatgtctgaacctgaagaaatcactacgatgtctggacag
aaattgcctctgaaaatgtctgtggattacatttccttctccgctcacacagattaccag
caaaccagtgaattcattcgtgctttgaaaccgcctcacgtgattttagtccatggagaa
cagaacgaaatggccaggttgaaagcagcactgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttaaacttcagagga
gaaaaactggccaaggttatgggatttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgtgacctg
tccaattatactgacttggccatgagcactgtgaagcagacccaagccattccatatact
ggtccctttaatttgctctattaccagctgcagaaattgacaggtgatgtggaagaatta
gaaattcaagaaaaacccgctctgaaagtgttcaaaaatattactgtaatacaagaacca
ggcatggtggtattagaatggttggcaaacccttctaatgatatgtatgcagatacagta
acaactgtgatattagaagtccagtcaaatcccaaaataagaaaaggtgcagtccaaaag
gtttctaaaaaattagaaatgcatgtttatagcaagcggttggagatcatgcttcaggac
atatttggagaagactgtataagtataaaggatgactctattcttagtgtcacagtggac
gggaaaactgccaaccttaacttggagacgcggactgtagaatgtgaagaaggaagtgaa
gatgatgaatccctccgagaaatggtggagctcgctgcacagagactatatgaggccctg
acaccagttcactga
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integrated database retrieval system
