Cebus imitator (Panamanian white-faced capuchin): 108302022
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Entry
108302022 CDS
T08783
Symbol
SOX13
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cimi03000
]
108302022 (SOX13)
Transcription factors [BR:
cimi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108302022 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108302022
NCBI-ProteinID:
XP_037593260
Ensembl:
ENSCCAG00000030362
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MSMRSPISAQLALDGVGTMVNCTIKSEEKKEPCHEAPQGSATAAEPQPGDPARDSQDGAD
PRAPPGAQHFFRGYWDCSSPEGNGSPEPKRPGASEAASGSQEKLDFNQNLKEVVPAIEKL
LSSDWKERFLGRNSMEAKDVKGTQESLAEKELQLLIMIHQLSTLRDQLLTAHSEQKNMAA
MLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQP
LPVTPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKRPGAMAAHHPLQEPSQPLNLTAK
PKAPELPNTSSSPSLKMSNCAPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDAR
QLLHSHSGALEGSPNTPFRKDLISLESSPAKERLEDSCVHPLEEAMLSCDMDGSRHFPES
RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQA
RLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVIPPQAGQVQ
MSSSDVLYPRAAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEGTDDRHSVADGEM
YRYSEDEDSEGEEKSDGELVVLTD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctgcccagctggccctggatggcgttggcaccatggtg
aactgcaccatcaagtcagaggagaagaaggagccttgccacgaggccccccagggctca
gccactgccgctgaacctcaacctggagacccagcccgggactcccaggatggtgctgac
ccccgagctccaccaggtgcccagcactttttcaggggctactgggactgtagctctcca
gagggtaatgggtccccagaacccaagagaccaggagcgtcggaggctgcctctggaagt
caggagaagctggacttcaaccaaaatttgaaagaagtggtgccagccatcgagaagctg
ttgtccagtgactggaaggagaggttcctcggaaggaactctatggaagccaaagatgtc
aaagggacccaagaaagcctagcagagaaggagctccagcttctgatcatgatccaccag
ctgtccaccctgcgggaccagctcctgacagcccactcggagcagaagaacatggctgcc
atgctgtttgagaagcagcagcagcagatggagctagcgcggcagcagcaggagcagatt
gcaaagcagcagcagcagctgattcagcagcagcataagatcaacctccttcagcagcag
atccagcaggttaacatgccttatgtcatgatcccagccttccccccaagccaccaacct
ctgcctgtcacccccgactcccagctggccttacccattcaacccattccctgcaaacca
gtggagtatccgctgcagctgctgcacagtccccctgccccagtggtgaagaggcctggg
gccatggccgcccaccaccccttgcaggagccctcccagcccctgaacctcacagccaag
cccaaggctcctgagctgcccaacacctccagctccccaagcctcaagatgagcaattgt
gcgccccgcccccccagccatgggggccccacgcgggacctgcagtccagccccccgagc
ctgcctctgggcttccttggtgagggggatgctgtcaccaaagccatccaggacgctcgg
cagctgctgcacagccacagtggagccttggaaggctctcccaacacccccttccgtaag
gacctcatcagcctggagtcatccccggccaaggagcggctggaggacagctgtgtgcac
ccactggaggaagccatgctgagctgcgacatggacggctcccgccacttccccgagtcc
cgaaacagcagtcacatcaagaggcccatgaatgccttcatggtgtgggccaaggatgag
cggaggaagatcctacaagccttcccagacatgcacaactccagcatcagcaagatcctt
ggatctcgctggaagtccatgacgaaccaggagaagcagccctactacgaggaacaggcg
cggctgagccggcagcacctggagaagtatcctgactacaagtacaagccgcggcccaag
cgcacctgcatcgtggaggggaagcggctgcgtgtgggcgagtacaaggccctgatgagg
acccgacgccaggatgcccgccagagctatgtgatccccccgcaggctggccaggtgcag
atgagctcctcggatgtcctgtaccctcgggcggcaggcatgccgctggcacagccgctg
gtggagcactatgtccctcgtagcctggaccccaacatgcctgtgatcgtcaacacctgc
agcctcagagaggagggcgagggcacagacgacaggcactcggtggccgacggcgagatg
taccggtacagcgaggacgaggactcggagggcgaagagaagagcgatggggagttggtg
gtgctcacagactga
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