Cebus imitator (Panamanian white-faced capuchin): 108302204
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Entry
108302204 CDS
T08783
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi05014
Amyotrophic lateral sclerosis
cimi05017
Spinocerebellar ataxia
cimi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108302204 (ATXN2L)
05017 Spinocerebellar ataxia
108302204 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
108302204 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108302204 (ATXN2L)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108302204 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
Motif
Other DBs
NCBI-GeneID:
108302204
NCBI-ProteinID:
XP_017381149
Ensembl:
ENSCCAG00000033928
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MLKPQPPQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAVASPCLG
PAAAAGSGLRRAAEGILAPQPPPPQQHQERPGAATIGSGRGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPSNRPSGETSVPPPPAAPHFLPVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTS
SASIPVTSSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQ
NEQKRFQLEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEAKGKEKEVDGLLTSESMGS
PVSSKTESVSDKEDKLSLAPAGSTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQV
KKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYI
PQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAA
GPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAI
VSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPV
QHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLP
HGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALS
ASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSL
SCDPAAPLPTASPALSDPDCLLT
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagccctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggccccccgggggcaccagccctcccaacggcgggctcccgggg
ccgctggccacctccgcggctccgcccgggcctccagcggtcgcctccccctgcctgggg
cctgcggccgctgccgggagcgggctccgccgggcagccgaaggcatcttggcgccgcag
ccgccgccgccgcagcagcaccaggagaggccgggggccgccaccatcggcagcggcagg
ggacagagcacaggaaagggacccccacagtcacctgtgtttgaaggcgtctacaacaat
tccagaatgctgcatttccttacagctgttgtgggctccacttgtgatgtaaaggtgaaa
aatggcaccacctatgagggtatcttcaagacgctaagctcaaagtttgaactagcagtg
gatgctgtgcaccggaaagcatctgagccagcaggtggccctcgtcgggaggacattgtg
gacaccatggtctttaagccaagtgatgtcatgctcgttcacttccgaaatgttgacttc
aactacgctactaaagacaagttcaccgattcagccattgccatgaactcgaaagtgaat
ggggaacacaaagagaaggtgcttcagcgctgggaggggggtgacagcaacagcgatgac
tacgaccttgagtccgacatgtccaatggatgggaccccaatgaaatgttcaagttcaat
gaagagaactacggtgtgaagaccacctatgatagcagtctttcttcttatacggtgccc
ttagaaaaggacaactcagaagagtttcgtcagcgagagctacgtgcggcccagttagct
cgagagattgaatcaagcccccagtaccgcctacggatcgccatggagaatgatgatggg
cgcactgaagaggagaagcacagtgcagtgcagcggcagggttcagggcgggagagcccc
agcttggcgtccagggaggggaagtatatccctctgcctcaacgagtccgggaaggaccc
cggggaggagttcgatgcagcagctctcggggcgggcggcctggccttagctctttgcca
cctcgtggccctcaccatctggacaatagtagccctggcccaggttctgaggcccgtggt
atcaatggaggcccttcccgcatgtctccaaaggcgcagcggcctctgagaggtgctaag
actctgtcttcgcccagtaataggccttctggagaaacttctgttccaccacctcctgca
gctccccattttcttccagtgggccggatgtatcccccgcgttctcccaagtctgctgca
cctgccccaatctcagcttcctgtcctgagcctcccatcggctcggcagtgccaacctct
tcagcctccattcctgtgacctcatcagtctcagatcctggagtgggttcgatttcccca
gcttctccaaagatctccctggcccccacagatgtaaaagaactctctaccaaggaacct
gggagaactctggagccccaggagctggctcggatagctgggaaagtccctggtcttcag
aatgaacagaaacgattccaactggaagaactgagaaagtttggggcccagtttaagctt
cagcccagtagctcaccggagaacagcctggatccttttcctccccggatcttaaaggag
gaggccaaaggaaaagagaaggaggttgatggtctcttgacttcagagtccatggggtct
cctgtctcctccaagacggagtccgtgtcggataaggaggacaaactatccctggcacca
gcaggaagcactgaggggccagagcagcccccaccaccttgcccaagccaaaccggcagc
cccccagtgggcctcatcaagggggaggacaaggatgagggccctgttgctgaacaagtg
aagaaatcaacgttgaaccccaatgccaaggagttcaatcctacaaagcctctgctgtct
gtgaataaatccactagtactccaacttctccggggccccggactcattcaactccctcc
atcccggtgctgacagcaggccagagtgggctatatagcccccagtacatctcctacata
cctcagatccacatgggaccagctgtgcaggcacctcagatgtatccgtatcctgtatct
aattcagtgcctgggcagcagggcaagtaccggggagcaaaaggctccctacccccgcag
cgctcggaccaacaccagccagcctcagccccgccgatgatgcaggcggccgcagctgct
ggcccgcctctggtggctgctacgccctattcttcctacatcccctacaaccctcagcaa
ttcccaggccagcctgccatgatgcagcccatggcccactacccctcacagccggtgttt
gcccccatgcttcaaagcaacccacgcatgctgacgtcgggcagccatccccaggccatc
gtgtcatcctccacccctcagtacccttctgcggagcagcctaccccccaagccctttat
gccactgttcaccagtcctacccacaccatgccacgcagctccatgcccaccagccgcag
ccagctaccacacctaccgggagccagccgcagtcccagcatgcggcccccagtcctgtc
cagcatcaggcggggcaggccccacacctgggcagtggacagccacagcagaatctgtac
cacccaggggccctgacaggcacaccgccctctctgccaccgggaccttctgcccagtcc
cctcagagcagcttcccccagccagccgctgtgtatgccatccaccaccagcagctgccc
cacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatcacagca
gccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccc
cagagtcatggggggcccccccaaggcgcggtgccccagagtggggtgcctgcactctca
gcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggccag
gcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcagaagccac
agtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcgctc
agttgtgatccagcagcccccctccccactgcctccccagctctcagtgaccccgactgt
ctcctgacttag
DBGET
integrated database retrieval system
