Cebus imitator (Panamanian white-faced capuchin): 108302263
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Entry
108302263 CDS
T08783
Symbol
USH1C
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cimi03037
]
108302263 (USH1C)
Cilium and associated proteins [BR:
cimi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
108302263 (USH1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
108302263
NCBI-ProteinID:
XP_017381301
Ensembl:
ENSCCAG00000030798
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPL
KWQYVDQFVSESGGGRGSLGSPGNWENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTD
RERLAEVRQRELQRQELLMQKRLAMESNKILQEQQEMERQRRKEIAQKAAEENERYRKEM
EQIVEEEEKFKKQWEEDWGSKEQLLLPKTITAEVHPVPLRKPKYDQGVEPELEPTDDPDR
GTEEQGEQKGKDKKKAKYDSLQDLRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEV
SETEREDLEESEKIQYWVERLCQTRLEQISSADNEISEMTTGPPPPPPSVSPLAPPLRRF
AGGLHLHTTDLDDIPLDMFYYPPKAPSALPVMPHPPSSNPPHKVPAPPVLPSSGHVSTSS
SPWVQHTPPPIPIPPPPSVPTQDLTPTRPLPSALEEALGNHPFRTGDTGSPAEDWEGKNH
SGKPTNSPVPEHSFPPTPKTFCPSPQPPRGPGVSTISKPVMVHQEPNFIYRPAVKSEVLP
QEMLKRMVVYQTAFRQDFRKYEEGFNPYSMFTPEQIMGKDVRLLRIKKEGSLDLALEGGV
DSPIGKVVVSAVYEGGAAERHGGIVKGDEIMAINGKIATDYTLAEAEAALQKAWNQGGDW
IDLVVAVCPPKEYDDELTFF
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaaaagtggcccgagaattccggcataaggtggattttctgattgaaaatgat
gcagagaaggactatctctatgatgtgttgcggatgtaccaccagaccatggacgtggcc
gtgctcgtgggagacctgaagctggtcatcaatgaacccagccgcctgcctctgtttgat
gccattcggcccctgatcccactgaagcaccaggtggaatatgaccagctgaccccccgg
cgctccaggaagctgaaggaggtgcgtctggaccgtctgcacccggaaggccttggcctg
agcgtgcgtggtggcctggagtttggctgtgggctcttcatctcccacctcatcaaaggc
ggtcaggcagacagcgtcgggctccaggtaggggatgagatcgtccggatcaatggatat
tccatctcctcctgcacccatgaagaggtcatcaacctcatccgaaccaagaaaactgtg
tccatcaaagtgagacatattggcctgattcccgtgaagagctctcccgatgagcccctc
aagtggcagtatgtggatcagtttgtgtcggaatctgggggtgggcgaggcagcctgggc
tcccccgggaattgggaaaacaaggagaagaaggtcttcatcagcctggtgggctcgcgt
ggccttggctgcagcatttctagcggccccatccagaagcctggcatcttcatcagccac
gtgaagcctggatccctgtctgctgaggtgggattggagacaggggaccagatcgtcgaa
gtcaacggcattgacttctctaacctggaccacaaggaggccgtgaacgtgctgaagagt
agccgcagcctgaccatctccatagtagctggagctggccgggagctgttcatgacggat
cgggagcggctggcagaggtgcggcagcgggagctgcagcggcaagagcttctcatgcag
aagcggctggcgatggaatccaacaagatcctccaggagcagcaggagatggagcggcaa
aggagaaaagaaattgcccagaaggcagcagaggaaaatgagagataccggaaggagatg
gaacagattgtagaggaggaggagaagtttaagaagcaatgggaagaagactggggctca
aaggaacagctactcctgcctaaaaccatcactgctgaggtgcacccagtacctcttcgc
aagccaaagtatgatcagggagtggagcctgagctcgagcccacagacgaccctgaccga
ggcacggaggagcagggagagcagaaaggaaaagataagaagaaagccaagtatgacagc
ctgcaggacttgagaaagaataagaaggaactggagtttgagcaaaagctttacaaagag
aaagaggaaatgctggagaaggaaaagcagctaaagatcaaccggctggcccaggaggtg
tctgagacagagcgggaagaccttgaagaatcggaaaagattcaatattgggtggagagg
ctctgtcagacacgccttgagcagatttcctctgctgataatgagatttcagagatgacc
acagggcccccacctcctcctccttctgtttctcccctggccccaccgttgagacgcttt
gcaggcggactgcacctgcacaccactgacctggacgacatccctttggacatgttctac
tatccccccaaggctccctctgctttgccggtgatgccccaccctccatcctccaaccca
ccccacaaggtcccggcaccccctgtcctcccctcatctggccatgtgagcacttcatcc
tccccctgggtgcagcacactccaccccccattcccatccctcccccaccatccgttccc
acccaagacctcactcccacccgcccactgccctcggcgctggaagaagcactgggcaac
catcccttccgcactggggacacaggcagtccagcggaggactgggagggcaagaaccac
agtgggaagcccaccaactcccctgtccctgaacacagcttcccacccaccccaaagaca
ttttgcccaagcccacagcctccacgaggccctggcgtgtccaccatctccaaacctgtc
atggtccaccaggaacccaatttcatctacaggccagctgtgaaatctgaagttctgcca
caggagatgttgaagaggatggtggtttatcagacagcattcagacaagatttccggaaa
tatgaggaaggcttcaacccctactccatgttcaccccagagcagatcatggggaaggac
gtccggctcctgcgcattaagaaggagggatccttagacctggctctggaaggcggtgtg
gactcccccattgggaaggtggtcgtttctgctgtgtacgaggggggagctgccgagcgg
catggtggcattgtgaaaggggacgagatcatggcaatcaacggcaagattgcgacagac
tacaccctggctgaggctgaggctgccctgcagaaggcctggaatcagggcggggactgg
atcgaccttgtggttgctgtctgtccccccaaggagtacgacgatgagctgaccttcttc
tga
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