Cebus imitator (Panamanian white-faced capuchin): 108302476
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Entry
108302476 CDS
T08783
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cimi03041
]
108302476 (DDX1)
03016 Transfer RNA biogenesis [BR:
cimi03016
]
108302476 (DDX1)
Enzymes [BR:
cimi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108302476 (DDX1)
Spliceosome [BR:
cimi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108302476 (DDX1)
Transfer RNA biogenesis [BR:
cimi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
108302476 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
108302476
NCBI-ProteinID:
XP_017381564
Ensembl:
ENSCCAG00000030085
UniProt:
A0A2K5R8X2
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHTGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIVFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPLDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgagattgcacaagctgtggaagagatg
gattggcttctcccaactgatatccaggctgagtctatcccattgatcctaggaggaggc
gacgtactcatggctgcagaaacaggaagtggcaaaactggtgcttttagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaaca
attaaaactggtgcttcagtgctcaacaagtggcagatgaacccgtatgacagaggatct
gcttttgcaattgggtcagatggtctttgttgtcaaagcagagaagtaaaagaatggcat
ggatgcagagctactaaaggattaatgaaagggaaacactactatgaagtatcctgtcat
gaccaagggttatgtagggtcgggtggtctactatgcaggcctctttggacctaggtact
gacaagtttggatttggcttcggtggaacaggaaagaaatcccataataaacagtttgat
aattatggagaggaattcactatgcatgataccattggatgttacttagatatagataaa
ggacatgtcaagttctccaaaaatggaaaagatcttggtctggcatttgaaataccacca
catatgaaaaaccaagccctctttcctgcctgtgttttgaagaatgctgaactgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggctttgttgccctttccaag
gcacctgatggttacattgtcaaatcgcagcacacaggtaatgcacaggtgacacaaaca
aagtttctccccaatgctccgaaagctctcatcgttgaaccttcccgggagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatacattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcccgggatcagctctctgttttggaaaatggagta
gatatagttgtaggtactccaggaagattggatgacttggtgtcaactggaaagctgaac
ttatctcaagttagattcctggtcctggatgaagctgatggtcttctttctcaaggttat
tctgattttataaataggatgcacaatcagattcctcaggttacctctgacggaaaaaga
cttcaggtgattgtttgctctgccactttgcattcttttgatgtgaagaaactgtctgag
aagataatgcattttcctacatgggttgacttaaaaggagaagactctgttccagacact
gtacaccatgttgttgtcccagtaaatcccaaaactgacagactctgggaaaggcttgga
aagaaccacattagaactgatgatgtacatgcaaaagataacacaagacctggtgctaat
agtccagagatgtggtctgaagctattaaaatcctcaagggggagtatgctgtccgggca
atcaaggaacataagatggatcaagcaattgtcttctgtagaaccaaaattgactgtgat
aacttggagcaatactttatgcaacaaggaggaggacctgataaaaaaggacaccagttc
tcgtgtgtttgccttcatggtgacagaaagcctcatgaaagaaagcaaaacttggaaaga
tttaagaaaggagatgtaagattcttgatttgcacagatgtagctgctagaggaattgat
atccatggtgttccttatgttataaatgtcactctgcctgatgaaaagcaaaactacgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggcaatttccctggtggca
acagaaaaagaaaaggtttggtaccatgtatgtagcagccgtggaaaagggtgttataat
acaagactcaaggaagatggaggctgcaccatatggtacaacgagatgcagttactgtct
gagatagaagaacacctgaactgtaccatttctcaggttgagccagatataaaggtaccc
ctggatgaatttgatgggaaagttacctatggtcaaaagagggctgctggtggtggaagc
tataaaggccatgtggatattttggcacctactgttcaagagttggctgcccttgaaaag
gaggcgcagacatcgttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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