Cebus imitator (Panamanian white-faced capuchin): 108303443
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Entry
108303443 CDS
T08783
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03030
DNA replication
cimi03410
Base excision repair
cimi03420
Nucleotide excision repair
cimi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108303443 (RFC1)
03410 Base excision repair
108303443 (RFC1)
03420 Nucleotide excision repair
108303443 (RFC1)
03430 Mismatch repair
108303443 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cimi03032
]
108303443 (RFC1)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108303443 (RFC1)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108303443 (RFC1)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108303443 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
Rad17
AAA_22
AAA_14
AAA_5
BRCT_2
AAA_16
nSTAND3
AAA_33
Zeta_toxin
AAA_17
AAA_18
AAA_7
AAA_30
TIP49
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
108303443
NCBI-ProteinID:
XP_017382752
Ensembl:
ENSCCAG00000019643
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETGKKSEKTKSDEETLKAKKGIKEIKVNNSRKEDDLKQKQPN
KKKRIIYDSDSESEEMLQVKNAKKQPEKTPVSSKPGNISRQDPVTYVSETDEEDDFMCKK
AASKSKENGRSANSHLGTSDVKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSKKK
MVSSKRKEPSQNTNDSGLNDEAIAKQLQLDEDVELERQLHEDEEFARTLAMLDEEPKTKK
ARKDTEEGETFSSVQASLSKAEKLKYPHKVKTEQFSDERKSCSPKKQTKYESSKESQQHS
KSSTDKIREVSSPKASSKLAIMKKKEESSYKEIEPVASKRKENAIELKGETKTPKKTKSS
PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVEAEMKKESKLERTPQKNAQGKRKISPSKKESESKKSKLTSKRDSSAK
TIKKETDVFWRGLDFKEQVAEETSGDGKARNLADDSSENKMENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLRNWHKSSSEDKKHAPKFGKFAGKDDGSSFKAVLLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMD
EVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQI
KGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRA
KKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGD
MKKHLMLLSRAADSXXXGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFP
SWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHLRDALVQPLTSQGVDGIQD
VVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEAHLTPYSLQAI
KASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKKKTKSSKPSKPEKDKESRK
GKGKSSKK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggagtaataccaagtggaaagaaacttgtaagtgaaaca
ggaaagaagagtgagaaaacaaagtctgatgaagaaactttgaaagcaaagaaaggaata
aaggaaatcaaggtaaataactcccgtaaagaggatgaccttaaacaaaagcaaccaaac
aagaaaaagaggatcatctatgattcagactcagagtcagaggagatgttgcaggtaaaa
aacgccaaaaagcaaccagaaaaaacgccagtgtcttctaaacccggtaacatttcacgg
caggatcctgttacatacgtttcagaaacagatgaagaagatgactttatgtgtaagaag
gcagcctctaaatcaaaagagaatggaagatctgcaaatagtcaccttggaacatcagat
gtgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acacccacatcagtgcttgattattttggaactggaagcgtccaaagatctaagaagaag
atggtgtcaagcaaaagaaaagagccttcacaaaatacaaatgattctggactaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgtagagctggagaggcagttgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctcgaaaggacacagaagagggagaaacgttttcatctgtccaagccagtttaagtaaa
gcagaaaaacttaaatatcctcataaagtaaaaacagaacaattttcagatgaaagaaag
agctgcagtcctaagaagcaaactaaatatgaaagttcaaaagaatctcagcaacattcc
aagtcatcaacggacaaaataagagaagtctcttctcccaaggccagttctaagctggca
attatgaaaaaaaaagaagagagctcttacaaagaaatagaacctgttgcctcaaaaaga
aaagaaaatgccattgaattgaaaggagaaacaaaaactcctaagaaaaccaaaagttcc
ccagctaagaaagagtctgtaagtcctgaagattctgaaaagaaacgcactaattaccaa
gcttatcgaagctacttaaatcgagaaggacccaaagctctgggctccaaagaaataccg
aagggagctgaaaattgcttggaaggcctcacgtttgtaatcacaggcgtgctggagtct
attgagcgagatgaggccaagtctctaattgaacgttatggggggaaagtaacaggaaat
gtcagcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgac
aaggctgcagccttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
actatgccaggcaagaaatccaagtacgaaatagcagttgaagctgagatgaagaaagag
tccaaactggagagaactccccaaaaaaatgcacaaggaaaaaggaaaattagtccatct
aaaaaggaatcagaatctaaaaagagcaagttgacttccaaaagggacagttcggcaaag
acaataaaaaaggaaacagatgtgttttggagaggcctggatttcaaggagcaggtggcc
gaggagacaagtggtgacggcaaggctagaaatttagctgatgacagcagtgaaaacaaa
atggaaaatttgctctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcaaggtgaccagagctgtgccaacaaactcctacgctggctccgaaactggcacaag
agttcttccgaagataaaaaacacgcaccaaagtttggtaaattcgccggcaaagatgat
ggctctagttttaaagcagtgttgctgtcaggccctccaggtgttggcaaaaccaccaca
gcttccctggtgtgtcaggagttgggatacagctacgtggaactgaatgcaagtgacacc
cgaagtaagaacagtttgaaggcgattgttgctgagtcactgaacaataccagcatcaaa
ggcttttattcaaatggagcagcctcttcagtaagcacgaaacatgctctcatcatggac
gaagtagatggcatggcaggcaatgaggataggggaggaattcaggaattaattggcctg
ataaaacatactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaagatt
cgttctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagatt
aagggtgctatgatgtctattgcatttaaagaaggtttaaagattccccctccagctatg
aatgaaataattttgggagccaatcaagatatcagacaggttttacataatctgagtatg
tggtgtgcacgaagtaaagcactaacctatgaccaggccaaggctgattctcacagggcc
aaaaaggatatcaaaatgggcccatttgatgttgcccggaaagtgtttgcagctggagag
gagactgctcacatgtcacttgtggacaaatcagatctcttttttcatgattattcaata
gcacccctctttgtccaggaaaactacattcatgtgaagcctgtagctgcagggggtgac
atgaaaaagcacttgatgcttttaagccgagcagcagacagcnnnnnnnntggtgactta
gtggacagccagattcggagtaagcaaaactggagtcttctgcctacgcaggccatttat
gccagtgttcttcctggagagttgatgagggggtacatgacccagtttcccaccttccca
agctggctggggaagcattcatctacaggcaaacacgatcgcattgttcaggacctggcc
ttgcatatgagtctcagaacttactccagcaaaaggacggtaaacatggattacctgtca
catctgagggatgcacttgtacagcctctgacctcacagggagtagatggaatacaggat
gttgttgcacttatggacacatattatttgatgaaagaagactttgagaatatcatggaa
atcagcagctggggtggcaaacctagtcccttttcaaagctggatcccaaggtgaaagca
gccttcacaagaacttacaataaggaagcccaccttactccatattcacttcaagctata
aaggcatctagacatagcacaagcccatccctggattcagaatacaatgaagagcttaat
gaagatgactctcaatctgatgagaaagaccaagatgctatagagactgatgccatgatc
aagaaaaagacaaaatcttcaaagccttcaaaaccagaaaaagataaggagtccagaaaa
ggaaaaggaaaaagttcgaagaaatga
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integrated database retrieval system
