Cebus imitator (Panamanian white-faced capuchin): 108304847
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Entry
108304847 CDS
T08783
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X2
KO
K19719
collagen type II alpha
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04151
PI3K-Akt signaling pathway
cimi04510
Focal adhesion
cimi04512
ECM-receptor interaction
cimi04974
Protein digestion and absorption
cimi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108304847 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108304847 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108304847 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
108304847 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
108304847 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cimi00536
]
108304847 (COL2A1)
Glycosaminoglycan binding proteins [BR:
cimi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108304847 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
108304847
NCBI-ProteinID:
XP_017384719
Ensembl:
ENSCCAG00000036418
UniProt:
A0A2K5S9J8
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCQGQDVQETGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDVKDCLSPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDDKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
DDGPSGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAG
PTGKQGDRGEAGAQGPMGPSGPAGARGIPGPQGPRGDKGEAGEPGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGGLRQHDAEVDATLK
SLNNQIESIRSPEGSHKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANIPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDGCTK
HTGKWGKTVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcagggccaggatgtccaggagactggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagccagagccctgccggatctgtgtctgtgacactggg
actgtcctctgcgacgacataatctgtgaagacgtgaaagactgcctcagccccgagatc
cccttcggagagtgctgccccatctgcccaactgacctcgccactgccagtgggcaacca
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggggaacaaggacccagaggggatcgtggtgacaaa
ggtgaaaaaggtgcacctggacctcgtggcagagatggagaacctgggacccctggaaat
cctggcccccctggtcctcctggcccccctggcccccctggtcttggtggaaactttgct
gcccagatggctggaggatttgatgacaaggccggtggtgctcagatgggagtaatgcaa
ggaccaatgggccccatgggacctcgaggacctccaggccctgcaggtgctcccgggcct
caaggatttcaaggcaatcctggtgaacctggtgaacctggcgtctctggtcccatgggt
ccccgtggtcctcctggtccccctggaaagcctggtgatgatggcgaagctggaaaacct
ggaaaagctggtgaaagaggtccaccaggtcctcagggtgctcgcggcttcccaggaacc
ccaggccttcctggtgtcaaaggtcacagaggttatccgggcctggacggtgctaaggga
gaggcgggcgcccctggtgtgaagggtgagagtggttcccccggcgagaatggttctccg
ggcccaatgggtcctcgtggtctgccaggtgaaagaggacggactggccctgctggtgct
gcgggtgcccggggcaacgatggtcagccaggccctgcagggcctccgggtcccgtcggt
cctgctggtggtcctggcttccctggtgctcctggagccaagggtgaagccggccccact
ggagcccgtggtcctgaaggtgctcaaggtcctcgtggtgaacccggtactcctgggtcc
cctgggcctgctggtgcctctggtaaccctggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgctcctggcttccctgggccacggggtcctcct
ggccctcaaggtgcaactggtcctctgggcccaaaaggtcagacgggtgaacctggtatt
gctggcttcaaaggtgaacaaggccccaagggagaacctggccccgctggcccccaggga
gcccctggacccgctggtgaagaaggcaagagaggtgcccgtggagagcctggtggcgtt
gggcccattggtccccctggagaaagaggtgctcctggcaaccgcggtttcccaggtcaa
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggccttgctggc
cccaagggagccaatggtgaccctggccgtcccggagaacctggccttcctggagcccgg
ggtctcactggccgccctggtgatgctggtcctcaaggcaaagttggcccttctggggcc
cctggtgaagatggtcgtcctggacctccaggccctcagggtgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggtgagcctggcaaagctggtgaaaag
ggactgcctggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgct
gctggaccccctggccctgctggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccctggcctcgtgggtcccaggggtgaa
cgaggtttcccaggggaacgtggctctcccggtgcccagggcctccagggtccccgtggc
ctccctggcactcctggcactgatggtcccaaaggtgcatctggcccagcaggccccccc
ggggctcagggccctccaggtcttcagggaatgcccggtgagaggggcgcagctggtatt
gctgggcccaagggcgacaggggtgatgttggtgagaaaggccccgagggagcccctgga
aaggatggtgggcgaggtctgacaggtcccattggcccccctggcccggccggtgctaac
ggtgagaagggagaagttggacctcctggtcctgcaggaagtgctggtgctcgtggcgct
ccgggtgaacgtggagagactggcccccctgggccagcaggatttgctgggcctcctggt
gctgatggccagcctggggccaagggtgagcaaggagaggctggccagaaaggtgacgct
ggtgcccctggtcctcagggcccctctggagcgcctgggcctcagggtcctactggagtg
actggtcctaaaggagcccgaggtgcccaaggccccccgggagccaccggattccctgga
gctgctggccgcgttggacccccaggctccaatggcaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagcggtccccctggccga
gctggtgaccccggcctccaaggtcctgctggaccccctggcgagaagggagagcctgga
gatgacggcccctctggtgccgatggtccaccaggtccccagggtctggctggtcagaga
ggcatcgtcggtctgcctgggcagcgtggtgagagagggttccccggcttgcctggccca
tcgggtgagcccggcaagcagggtgctcctggagcatctggagacagaggtcctcctggc
cccgtgggtcctcctggcctgaccggtcctgcaggtgaacctggacgagagggaagcccc
ggcgctgatggtccccctggcagagatggcgcagctggagtcaagggcgatcgtggtgag
gctggtgccgtgggagctcctggagcccctgggccccctggctctcctggccccgctggt
ccaactggcaagcagggagacagaggagaagctggtgcacaaggccccatgggaccctca
ggaccagctggagcccggggaatcccgggccctcaaggcccccgtggcgacaaaggagag
gctggagagcctggcgagagaggcctgaagggacaccgtggcttcactggtctgcagggt
ctgcccggcccacctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccctgttggtccctctggcaaagatggtgctaatggaatc
cctggccccattgggcctcctggtccccgtggacgatcaggcgaaaccggccctgctggc
cctcctggaaatcctggaccccctggtcctccaggtccccctggccctggcatcgacatg
tctgcctttgctggccttggccagagagagaagggccccgaccccctgcagtacatgcgg
gccgaccaggcagctggtggcctgagacagcatgacgctgaggtggatgccaccctcaag
tccctcaacaaccagatcgagagcatccgcagccccgagggctcccacaagaaccctgcc
cgcacctgccgagacctgaaactctgccaccctgagtggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgtgtctaccccaacccagccaatattcccaaaaagaactggtggagcagcaag
agcaaggagaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctacgccta
ctgtccacggagggctcccagaacatcacctaccactgcaagaacagcattgcctacctg
gatgaagcagctggcaacctcaagaaggccctgctcatccagggctccaacgacgtggag
attcgggcagagggcaatagcaggttcacgtacactgccctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactgtcatcgagtaccggtcacagaagacctcacgcctc
cccatcattgacattgcacccatggacataggagggcctgagcaggaattcggtgtggac
atagggccagtctgcttcttataa
DBGET
integrated database retrieval system
