Cebus imitator (Panamanian white-faced capuchin): 108305046
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Entry
108305046 CDS
T08783
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03030
DNA replication
cimi03410
Base excision repair
cimi03420
Nucleotide excision repair
cimi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108305046 (RFC5)
03410 Base excision repair
108305046 (RFC5)
03420 Nucleotide excision repair
108305046 (RFC5)
03430 Mismatch repair
108305046 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cimi03032
]
108305046 (RFC5)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108305046 (RFC5)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108305046 (RFC5)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108305046 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
108305046 (RFC5)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108305046 (RFC5)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108305046 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
108305046 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DUF815
DEAD
ResIII
AAA_5
ATPase_2
AAA_19
AAA_30
TniB
PhoH
nSTAND3
TIP49
AAA_7
DNAX_ATPase_lid
Thioredoxin_6
bpMoxR
Mg_chelatase
NPHP3_N
AAA_25
AAA_28
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108305046
NCBI-ProteinID:
XP_017385047
Ensembl:
ENSCCAG00000038027
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MATSRESCFCARTLERKGLRVRSRLVAVQALGLRNDLSGSGRLRLPAMETAALKQQEPPA
AAKIRNLPWVEKYRPQTLNDLISHQDILNTIQKFISEDRLPHLLLYGPPGTGKTSTILAC
AKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQD
AQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEE
KVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDW
MLNQDFTTAYRNITELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLLTKMADIEYRLS
VGTNEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccacttctcgcgagagttgtttttgcgcgcgaactcttgagcgcaagggtctcagg
gtcaggtcgcggctggtcgctgtgcaggcgcttgggttacgcaacgatctcagcggatct
ggtcgccttcgtctccccgccatggagactgcagcgctcaagcagcaggagccgcccgca
gcggccaagatcaggaacctgccctgggttgagaaataccggccacagaccctgaatgat
ctcatttctcatcaggacattctgaataccattcagaaatttatcagtgaagaccgactg
ccacatttgcttctctatggccccccagggacgggcaagacatccacgatcctagcctgt
gcaaagcagctatataaagacaaagaatttggctccatggtcttggagctgaatgcttct
gatgaccgaggaatagacatcgttcgaggaccaatcctgagctttgctagcacaaggaca
atatttaagaaaggctttaagctggtgatcttggatgaagcagatgccatgactcaggat
gcccagaatgccttgagaagagtaattgagaaattcacagaaaataccagattctgcctc
atctgtaactatctgtcaaagatcatccccgccttgcagtcccgctgtacgaggtttcgg
ttcggtcccctgacacctgaactcatggttccccgcctggaacatgtcgtagaagaagag
aaagttgatataagcgaagatggaatgaaagcacttgtcaccctttccagcggagacatg
cgcagggctctgaacattttgcagagcaccaatatggccttcgggaaggtgacggaggag
actgtctacacctgcaccgggcatccgctcaagtcagacatcgccaacatcctggactgg
atgttgaatcaagatttcaccaccgcctacagaaatattacagagttgaaaactctgaag
gggttggcactgcacgatatcctgacagaggtacacttgtttgtgcatagagttgacttt
ccctcttcagttcgaatacatttattgaccaaaatggcagacattgagtacaggctttct
gttggcaccaatgagaagatccagctgagttccctcattgctgcttttcaagtcaccaga
gacctgattgtagcagaggcctag
DBGET
integrated database retrieval system
