Cebus imitator (Panamanian white-faced capuchin): 108305230
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Entry
108305230 CDS
T08783
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04820
Cytoskeleton in muscle cells
cimi05169
Epstein-Barr virus infection
cimi05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108305230 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
108305230 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
108305230 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108305230 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cimi04812
]
108305230 (VIM)
04147 Exosome [BR:
cimi04147
]
108305230 (VIM)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
108305230 (VIM)
Cytoskeleton proteins [BR:
cimi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
108305230 (VIM)
Exosome [BR:
cimi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108305230 (VIM)
Exosomal proteins of other cancer cells
108305230 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
GeBP-like_DBD
DUF7491
TPR_MLP1_2
DUF4515
Motif
Other DBs
NCBI-GeneID:
108305230
NCBI-ProteinID:
XP_017385264
Ensembl:
ENSCCAG00000029506
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MAVGGDPRPYRGYKNSSLGGVPSSATLAPGSPRQRRSRAPTTHTHRALARLSSGSQSAPP
PPTSPSPPSAAMSTRSVSSSSYRRMFGGPGTASRPSSSRSYVTTSTRTYSLGSALRPSTS
RSLYASSPGGVYATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQE
LNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKA
RVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQE
EIAFLKKIHEEEIQELQAQIQEQHVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEE
WYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEE
NFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIVTYRKLLEGEES
RISLPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgggaggggaccctcgtccctacaggggttataaaaacagctccctcggcggg
gtcccgtcctctgccactctcgctccgggatccccgcgccagagacgcagccgcgctccc
accactcacacccaccgcgccctcgctcgcctctcctccgggagccagtccgcgccaccg
ccgccgaccagcccatctccaccctccgcagccatgtccaccaggtccgtgtcctcgtcc
tcctaccgcaggatgttcggcggcccgggcaccgcgagccggccgagctccagccggagc
tacgtgaccacttccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagc
cgcagcctctacgcctcgtccccgggcggcgtgtatgccacgcgctcctcggcagtgcgc
ctgcggagcagtgtgcccggggtgcgactgctgcaggactcggtggacttctcgctggcc
gacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggag
ctgaatgaccgcttcgcaaactacatcgacaaggtgcgcttcctggagcagcagaataag
atcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctc
tacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaagcc
cgcgtcgaggtggagcgcgacaacctggccgaggacatcatgcgcctccgggagaaattg
caggaggagatgcttcagagagaggaagccgagagcaccctgcaatctttcagacaggat
gttgacaatgcgtctctggcacgtcttgaccttgaacgcaaagtggaatccttgcaagaa
gagattgcctttttgaagaaaatacacgaagaggaaatccaggagctgcaggctcagatt
caggaacaacatgtccagatcgatgtggacgtttccaagccggacctcacggctgccctg
cgtgacgtacgtcagcagtatgaaagtgtggctgccaagaacctgcaggaggcagaagaa
tggtacaagtctaagtttgccgacctctccgaggctgccaaccgaaacaatgatgcccta
cgccaggcaaagcaggagtccaatgagtaccggagacaggtgcagtccctcacctgtgaa
gtggatgctcttaaaggaaccaacgagtccctggaacgccagatgcgtgaaatggaagag
aactttgccgttgaagctgctaactaccaagacactattggccgcctgcaggatgagatt
cagaacatgaaggaggaaatggctcgtcaccttcgtgaataccaagacctgctcaatgtt
aagatggcccttgacattgagattgtcacctacaggaagctgctggaaggcgaggagagc
aggatttctctgcctcttccaaacttttcctccctgaacctgagggaaactaatctggat
tcactccctctggttgacacacactcaaaaaggacacttctgattaagacggttgaaact
agagatggacaggttatcaacgaaacttctcagcatcatgatgaccttgaataa
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