Cebus imitator (Panamanian white-faced capuchin): 108305315
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Entry
108305315 CDS
T08783
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cimi03000
]
108305315 (RC3H1)
04121 Ubiquitin system [BR:
cimi04121
]
108305315 (RC3H1)
Transcription factors [BR:
cimi03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
108305315 (RC3H1)
Ubiquitin system [BR:
cimi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108305315 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108305315
NCBI-ProteinID:
XP_017385400
Ensembl:
ENSCCAG00000025652
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSATILPDE
GAVDLPNRKPPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPIPPRGPTDLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAA
PPFEPAPYQQGMYYTPPPQCVSRFVRPPPSAPEPAPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPIYPSHYDGRQVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQIESYYP
VAPHPPRIRASYLREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPTFHPEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPAKPINISDYSPYGTHSGWGGSPYSPHQNIPSQGHFSERERISMSEVASHGKPLPS
AEREQLRLELQQLNHQISQQTQLRGLEAVSNRLVLQREANTLAGQSQPPPPQPPKWPGMI
SSEQLSLELHQVEREIGKRTRELNMVSVTQGEEGEGEMKSFIENKGQPELQNKVPTEDLT
LTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDNNDSQRSGVTPSSAP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctaaataaactccaccgcaaggcttgcccatttgaccagaccactatcaatacagac
attgagctcctccctgtgaactcagcattgctgcagcttgtgggtgctcaggtccctgag
cagcagccgattactttgtgtagtggggtggaagacacaaagcattatgaagaagccaag
aaatgtgtagaagaattagcattgtacttaaaaccgctcagcagtgctagaggagtgggt
ctgaacagcactactcagagtgttctgagtcgcccaatgcagaggaagcttgtgactctg
gtccactgtcaactagtagaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacggacagttacagagctcattctccagcaccagaatcctcagcagctctcc
tccaatctttgggcagcagtaagggctaggggctgccagttccttggaccagcaatgcag
gaggaagctttaaagctggttctgctggccttagaagacggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgttcagctcctttatagagcctcctgtttcaaggtcaccaaacgc
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgagg
cgagaacatgactcccagatagtgcagattgctatggaagccggcttacgaattgcacca
gaccaatggtcctctttgctttatggagaccagtctcataaatctcacatgcagtccatt
attgacaagttgcagacaccagcctcttttgcacagagtgttcaggaactaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctgtta
gcaaacattgaccctagtccagatgctcctcctcctacgtgggaacagctggaaaatggg
ctggttgctgtgcgtacagtggtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagagaggaggatgccctcgtggggccagctgtacgtttgcacactcacag
gaggaactggaaaaatttcgcaaaatgaacaagcgcctggttccgagaagacccttgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcagcaactatccttccagatgaa
ggtgcagtggatctccctaacagaaaaccgcctgctctgccaaatggaattgtatcagca
gggaatacagtaacacagcttattccacgagggacagaccccagctatgattctagtcta
aaaccaggaaaaatagatcatctgagcagtagtgctcctggatctcctcctgacctgcta
gaatctgtccctaagagtatttctgccttacctgtgaatccacatcctatacctccaagg
gggccaacagatctgcctccaatgcctgtcaccaaaccacttcagatggtacctcgaggt
tcgcagttatatccagcacaacagacagatgtttattatcaggatcctcgaggagcggct
ccaccatttgaaccagcaccttatcagcagggtatgtattatactccaccaccacaatgt
gtgtcccgctttgtcagacctccaccatctgctcctgaacctgctcctccctacttggat
cattatccaccttacctccaagatcgtgttgtaaactctcagtatggcacacagccacag
cagtacccacctatatacccatctcactatgatggccgtcaagtgtaccctgctcagtcg
tacacgagagaagagatattccgagaaagccctatacccattgagattccacctgcagca
gtaccatcctatgtaccagaatccagagaaagataccaacagatcgagagttactatcca
gtggctcctcatccacctcggatcagagcttcgtacctcagagaaccaccttatagccgg
cttcctcctcctccccagcctcatcctagtctagatgaactacatcgccgacgaaaggaa
ataatggcccagctagaagaaagaaaggttatctctccacctccttttgcaccgtcacca
accttgcctcctacctttcatccagaagaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtactctccctggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagggaccaacgattagatcttcagagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtgtctcggtttggt
gccatctcacgaacttccaaaactatatatcagggtgctggtccaatgcaggctatggca
cctcagggagctcctgcaaaacctattaacatttcggattatagtccatatggaacccac
agtggctggggaggttctccatattcacctcatcaaaacataccatctcagggacacttc
agtgagagggagagaatatctatgtcagaagtggccagtcatggaaaaccccttccatct
gctgagagagaacagctacgactagaattgcagcaattgaaccatcagattagccagcag
acccagctacgtggactagaggctgttagtaacaggctggtgttgcagagggaggcaaac
accctggcaggccagtcgcagcctccaccaccacaacctccaaaatggcctggaatgatc
tcaagtgagcagttgagcttggaactgcaccaagtggaaagggaaatcgggaagagaaca
cgggaactgaatatggtgagtgttacacagggagaagagggggaaggtgaaatgaaatct
ttcatagaaaacaagggacaaccagaactacaaaacaaggttccgactgaggatcttaca
ttgacattcagtgatgtaccaaatggatcagccttgacacaagagaatatcagcctccta
tcaaacaagaccagctctctgaacctatcagaggaccctgagggaggtggggataataat
gactcccagagatcaggagttactcccagttctgctccttaa
DBGET
integrated database retrieval system
