KEGG   Cebus imitator (Panamanian white-faced capuchin): 108305615
Entry
108305615         CDS       T08783                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cimi  Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cimi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108305615 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cimi03041]
    108305615 (PRPF4)
Spliceosome [BR:cimi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    108305615 (PRPF4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st ANAPC4_WD40 PRP4 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 108305615
NCBI-ProteinID: XP_017385840
Ensembl: ENSCCAG00000028990
LinkDB
Position
Unknown
AA seq 522 aa
MASSRASSTQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGI
EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT
LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW
IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS
PNSKLLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA
ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH
QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY
HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP
GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcttcctcgcgagcttcctccacgcaggcaaccaaaactaaagcgcctgatgactta
gttgctccggttgtgaagaagccacacatctattatggaagtttggaagagaaggagagg
gagcgtctggccaaaggagagtctgggattttggggaaagaaggacttaaagcaggaatc
gaagctggaaatataaatataacctctggagaagtgtttgagattgaagagcacatcagt
gagcgacaggcagaagtattggctgagtttgagagaaggaagcgagcccggcagatcaat
gtctccacagatgactcagaggtcaaggcttgccttagagccttgggggaacctatcaca
ctttttggagagggccctgctgaaagaagagaaaggttaagaaatatcctctcagtcgtc
ggtactgatgccttaaaaaagaccaaaaaggatgatgagaaatctaagaagtccaaagaa
gagtatcagcaaacctggtatcatgaaggaccaaacagcttgaaggtggcgagactatgg
attgccaattattcactgcccagggcaatgaaacgcttggaagaggcccgactccataag
gagattcctgagacaacgaggacctctcagatgcaggagttgcacaagtctctccggtct
ttgaataatttttgcagtcagattggggatgatcgccctatctcctactgtcactttagt
cccaattccaagttgctggctacagcttgttggagtgggctttgcaagctctggtctgtt
cctgactgcaacctccttcacactcttcgaggacataacacaaatgtgggagcaattgta
ttccatcccaaatctactgtctccttggaccaaaaagatgtcaacctggcttcctgtgca
gctgatggctctgtgaagctttggagtctcgacagtgatgaaccagtggcagatatagaa
ggccatacagtgcgtgtggcccgggtgatgtggcatccatcaggacgtttcctgggtacc
acctgctatgaccgttcatggcgcttatgggatttggaggctcaagaggagatcctgcac
caggagggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggct
ggcactgggggactggatgcatttggtcgagtttgggacctacgcacaggacgttgcatc
atgttcttagaaggccacctgaaagaaatttatggaataaatttctcccccaatggctat
cacatcgcaaccggcagtggtgacaacacctgcaaagtgtgggaccttcgacagcggcgt
tgcgtctacaccatccctgctcatcagaacttagtgactggtgtcaagtttgagcctatc
catgggaacttcttgcttaccggtgcctatgacaacacagccaagatctggacgcaccca
ggctggtccccgctgaagactctggctggccacgaaggcaaagtgatgggcctagatatt
tcttccgatgggcagctcatagccacttgctcatatgacaggaccttcaagctgtggatg
gctgaatag

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