Cebus imitator (Panamanian white-faced capuchin): 108307168
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Entry
108307168 CDS
T08783
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03440
Homologous recombination
cimi03450
Non-homologous end-joining
cimi04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108307168 (RAD50)
03450 Non-homologous end-joining
108307168 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108307168 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cimi03032
]
108307168 (RAD50)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108307168 (RAD50)
DNA replication proteins [BR:
cimi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
108307168 (RAD50)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
108307168 (RAD50)
BRCA1-C complex
108307168 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
108307168 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
108307168
NCBI-ProteinID:
XP_017387940
Ensembl:
ENSCCAG00000037418
UniProt:
A0A2K5SFP9
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMICTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKAVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKEYQMELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEHNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERKLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERQIKNFHILVKERQERETKTANQLMNDFVE
KETLKQKQIDEIRDKKTGLGRIIELKSEILSKKQNELKNVKYELQQLEGSSDRILELDQE
LIKAERDLSKAEKNSNVETLKMEVINLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSVIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKMCLTDVTIMERFQMELKDVERKIAQQAAKLQGINLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQVSPLETTLEKFQQEKEELIDKKNTSNKIAQDKLNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINEDMRIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDNIKRNHSLALGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGFNVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggtgtgaggagttttggaattgaggacaaa
gataagcaaattatcactttcttcagcccccttacaattttggttggacccaatggggcg
ggaaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgtgagagcc
cagattcgtctgcaatttcgtgatgtcaatggagaacttatagctgtacaaagatctatg
atatgtactcagaaaagcaaaaagacagaatttaaaactctggaaggagtcattactaga
acaaagcatggtgaaaaagtcagtctaagctctaagtgtgcagaaattgaccgagaaatg
atcagttctcttggggtttccaaggctgtgctaaataatgtcattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaagatacattaaagccttggaaacacttcggcaagtacgtcagacacaaggt
cagaaagtaaaggaatatcaaatggaactcaaatatctgaagcaaaataaggaaaaagct
tgtgagattcgtgatcagattacaagtaaggaagcccagttaacgtcttcaaaggaaatt
gttaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacat
aatctctctaaaataatgagacttgacaatgaaattaaagccttggagagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacttatatcacaatcaccagaggacagtaagggagaaagaaagg
aagttggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagagctgcttgttgaacagggtcgtctacagctacaagcagatcgccat
caagagcatatccgagctagagattcattaattcagtctttggcaacacaactagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaaaaactttcacatccttgtg
aaagagagacaagaaagggaaacaaaaactgccaaccaactgatgaatgactttgtagaa
aaagagactctgaaacaaaaacagatagatgagataagagataagaaaactggactggga
agaataattgagttaaaatcagaaatcctaagtaagaagcagaatgagctaaaaaacgtg
aagtatgaattacagcagttggaaggatcttcagaccggattcttgaactggaccaggag
ctcataaaagctgaacgtgatttaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaatggaagtaataaaccttcaaaatgaaaaagcagacctagacaggaccctgcgtaaa
cttgaccaggagatggagcagttaaaccatcatacaacaacacgaacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaacctcactgttgggatattttcccaacaaaaaacagcttgaagactggcta
catagcaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcagaataaaaatcatataaataatgaactaaaaaggaaggaagag
cagttgtccagttacgaagacaagctgtttgatgtttgtggtagccaggattttgacagt
gatttagacaggcttaaagaggaaattgaaaaatcatcaaaacagcgagccatgctggcc
ggagccacagcagtttactcccaattcattactcagctaacagatgaaaaccagtcatgt
tgtcccgtttgtcagagagtttttcagacagaggctgaattacaagaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaggaaaagcggcgtgatgaaatgctgggacttgtgcccatgaggcaaagcgtaatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcctaaagaacgacatagaagaacaagaaacactcttgggtacaataatgcct
gaagaagaaagtgctaaaatgtgcctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaatcgcacaacaagcagctaagctacaaggaataaac
ttagatcgaactgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaagttagat
acagtttctagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
cagcatctaaaaagtacaacaaatgagctaaaatctgagaaacttcagatatccactaat
ttgcaacgtcgtcagcaattggaggagcagactgtggaattatccactgaagttcagtct
ttgtacagagagataaaggatgctaaagagcaggtaagccctttggaaacaacattggaa
aagttccagcaagaaaaagaagaattaatcgacaaaaaaaatacaagcaacaaaatagca
caggataaactgaatgatattaaagagaaggttaaaaatattcatggttatatgaaagac
attgaaaattatattcaagatgggaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcagctaagtgaatgcgagaaacacaaagaaaagataaatgaagat
atgcgaatcatgagacaagatattgatacgcagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttgcaaatgaaaaatgaacatcagaagttg
gaagagaacatagataatataaaaagaaatcacagtttggcattagggcgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaaccgcaatttcgggatgct
gaggaaaagtatagagaaatgatgattgttatgaggacaacagaacttgtgaacaaggat
ctggatatttattataagactcttgaccaagcaataatgaagtttcacagtatgaaaatg
gaagaaatcaataaaattattcgtgatctgtggcgaagtacctatcgtggacaagatatt
gaatacatagaaatacgctctgatgctgatgaaaatgtatcagcttctgataaaaggcgg
aattataactaccgagtggtgatgctgaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcatcattcgcctggccctggctgaaacg
ttctgcctcaactgtggcatcattgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacagcagcgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagcttttaggacgttct
gaatatgtggagaaattctacaggattaaaaagaacatcgatcagtgctcagagattgtg
aaatgcagtgttagttccctgggatttaatgttcattaa
DBGET
integrated database retrieval system
