Cebus imitator (Panamanian white-faced capuchin): 108308525
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Entry
108308525 CDS
T08783
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03440
Homologous recombination
cimi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108308525 (PALB2)
03460 Fanconi anemia pathway
108308525 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108308525 (PALB2)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108308525 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
108308525 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
108308525
NCBI-ProteinID:
XP_017389888
Ensembl:
ENSCCAG00000030821
UniProt:
A0A2K5RD49
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKIRHFSRKTVEEQDRLSQ
QEFSPQLNHSELKNKISLYNKLHIKTHLDEETGEKTSITLDVGPDSSNPGDGPGGLPIQR
TDDTQEHFPHRVSDPDSEKKQKLPRSKKQQKRTFISQERDCVFDTDSLRLAGKSLKEQEE
ISSKSPTRSPVAEIRTHFLSLQSELLDSPEPITETNGDSILIPPTAQPEKGVDTLLRTNF
TKTTTVPLQTPSDSRRSQHFEHIPPKGSSELTTHGLKNIRFTSPISLEAQGKKVTVSTEN
LVVNKAVSGHLPTSSNLEADISCSTNELTHNNLSANENQNLKEQNQTEKSPSDALDGRNE
NLQENGILSQPKSLSLEATSPLSAEKHSCTILEGLLFPAEYYVRTTRSMSNCQRKVAVEA
VIQNHLDVKKKGCKNKNKDASKNLNLSNEETDQSEIRVSDTCTGQPSSRNSQKLFSLTKV
NSPTGPTEDNDLSRKAVAQASSRRNRGKRKSACTPASDHCEPLLPTSSTSVINRAKEEVT
SHKYQNKKAVIQEKGKKSRHQKEDSLSWSNSAYLSLAGDAFTASFHKNGMLSLKQLSSFL
SITDFQLPDEDFGPLKLEKLKSCSEKLMEPFESKMYGERHLKGRNCIFPEELSPKCMDTE
MEDLEEDVVVLPGKSHPKMPNPQSQCAKKGLSSSILLYTPLNTVVPDDNDRPTADMCSPA
FPILGTTPAFGSQGSYEKACTEVTGRTCCTPQLAHLKDSICLASDDKQCDSSSSPAKPHT
TLQVSGRQGQPTCDCESVLQGTSPPVESFTFKENQLYGNTCQELRKQFVEQNEVAVLPAS
GSINPGNLKLVSKLKNLSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALGAWQWK
KLYTWHFTEVPVLQIVPVPDVYNLVCVALGNLEIREIRALLCSSDDENEKQVLLKSGNIK
AVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGSKENQFLMPPEETILTFAEVQGMQEALL
GTTIMNNIVIWNLKTGQLLRKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCTKESESLES
PVFQLIAINPKTTLSLGVMLYCLPQGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGHC
TALLPPVSDQNWSFVKWSGTDSHLLAGQKDGNIFVYHYS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttaaaggagaaa
ttagcattcttgaaaagggaatacagcaagacactagcccgccttcagcgtgctcaaaga
gctgaaaaaataaggcattttagtaggaaaacagtagaagaacaagatcgcttgtcccag
caggaattctcaccacagctaaaccactcagaacttaaaaataaaatatctctttataac
aagttacacatcaaaacccatcttgatgaagaaactggagaaaagacatctatcacactt
gatgttgggcctgactcttctaaccctggagatggcccaggaggattacctatacaaaga
acagatgacacccaagaacatttcccacacagggtcagtgaccctgatagtgagaaaaaa
cagaaactgccaagaagtaagaagcagcagaagagaacatttatttcacaggagagagac
tgtgtctttgacactgattcactcagactggctgggaaaagcctaaaggaacaggaagaa
atcagcagcaaaagtcctactagatcaccagtagctgaaataagaacccactttttaagt
cttcagtctgaacttctggattctccagaaccaattacagaaactaatggagacagtata
ttaattccaccaactgcccaaccagaaaaaggtgttgatacactcctaagaactaatttc
accaagacgactacagttcctttacagactccatcagatagtagaaggagtcagcacttt
gaacatattcctcctaaaggtagcagtgagcttactactcacggcctaaaaaacattaga
tttacttcacctataagtttggaggcacagggcaaaaaagtaactgtctctacagagaac
ctggttgtaaataaagctgtaagtggccatctgcccacaagttctaatttagaggcagat
atttcatgttctacaaatgaactcactcacaataacttatcagcaaatgaaaaccaaaac
ttaaaagaacaaaatcaaacagaaaaatctcccagcgatgctcttgatggcagaaatgaa
aatcttcaggaaaatggtattctaagtcaacctaagagtcttagcctagaagcaacttct
cctctttctgcagaaaaacattcttgtacaatacttgaaggtcttctgtttcctgcagaa
tattatgttagaacaacacgaagcatgtccaattgccagaggaaagtagccgtggaggct
gtcattcagaatcatttggatgtcaaaaagaaagggtgtaaaaataaaaataaggatgca
agtaaaaatttaaacctttccaatgaggaaaccgaccaaagtgaaattagggtgtctgac
acatgcacaggacaaccgagttcaagaaactctcagaaacttttctcattaactaaagtc
aactctcccactgggcccactgaagacaatgacttgtctaggaaggcagttgcccaggca
tctagtagaagaaacagaggaaaaagaaaatcagcctgcaccccagcatcagatcattgt
gaaccacttttgccaacttccagcacatcagttattaatagggccaaggaggaagtcacc
tcgcacaaatatcagaacaaaaaagcagttattcaagagaaagggaagaaaagtcgtcat
caaaaagaggactccctttcttggagtaatagtgcttatttatccttggctggtgatgct
ttcacagcttcattccataagaatggaatgctgagtttaaagcaactatcgtcttttctc
agtatcacagactttcagttacctgatgaagactttgggcctcttaagcttgaaaaactg
aaatcctgctcagaaaaactaatggagccctttgaatcaaaaatgtatggagagaggcat
cttaaagggagaaattgtatttttccagaggaactgagtcctaaatgcatggatacagaa
atggaagacttagaagaggatgttgttgttttgccaggaaaatcgcatcccaaaatgcca
aacccacaaagccagtgtgcaaagaagggcctttcttcatccatattactttatactcct
ttaaatacagttgtgcctgatgataatgatagacctactgcagacatgtgttcacctgct
ttccccatcttaggtactactccagcctttggctctcaaggctcctatgaaaaagcatgc
acagaggtcactggacgaacttgctgtacaccccaacttgctcatttgaaagactcaatc
tgtcttgccagtgatgataaacagtgcgacagttcaagcagcccagcaaaaccacatacc
accctgcaagtatcaggcaggcaaggacaacctacctgtgactgtgagtctgtcctgcaa
ggaacatccccacccgttgagtcattcacttttaaagaaaatcagctctatggaaacaca
tgccaggagttgcgtaaacagtttgtcgaacagaatgaagtagcagtgcttcctgcttct
ggtagcataaacccaggcaacctaaaattggtttcaaagttaaagaatctttcaggttcc
tgttccgtagatgtgagtgccatgttttgggaaagagccggttgtaaagagccatgtatc
ataactgcttgtgaagacgtagtttctctttggaaagctttgggtgcttggcagtggaaa
aaactttatacctggcacttcacagaggttccagtattacagatagttccagtgcctgat
gtgtataatctggtgtgtgtagctttgggaaatttggaaatcagagagatcagggcattg
ctttgttcctctgatgatgaaaatgaaaagcaagtactactgaagtctggaaatataaaa
gctgtgcttggcctgacaaagaggaggctagttagtagcagtgggaccctttctgatcaa
caagtagaagtcatgacgtttgcagaagatggaggaagcaaagaaaaccaatttttgatg
ccccctgaggagactattctaacttttgctgaggtccaagggatgcaagaagctctgctt
ggtactactattatgaacaacattgttatttggaatttaaaaactggtcaactcctgaga
aagatgcacattgatgattcttaccaagcttcagtctgtcacaaggcctattctgaaatg
gggcttctgtttattgtcctgagtcatccctgtaccaaagagagtgagtcgttggaaagc
cctgtgtttcaactgattgcgattaaccctaagacgaccctgagtctgggtgtgatgctg
tactgtcttcctcaagggcaggctggcaggttcctggaaggtgatgtgaaagatcattgt
gcagcagcaatcttgacttctggaacaattgccatttgggatttacttctcggtcactgc
actgccctcctcccacctgtctctgaccaaaactggtcttttgtgaaatggtcaggtaca
gattctcatttgttggctggacaaaaagatggaaatatatttgtatatcactactcataa
DBGET
integrated database retrieval system
