Cebus imitator (Panamanian white-faced capuchin): 108308926
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Entry
108308926 CDS
T08783
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108308926 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108308926 (BARD1)
04121 Ubiquitin system [BR:
cimi04121
]
108308926 (BARD1)
03036 Chromosome and associated proteins [BR:
cimi03036
]
108308926 (BARD1)
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108308926 (BARD1)
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
108308926 (BARD1)
Ubiquitin system [BR:
cimi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108308926 (BARD1)
Chromosome and associated proteins [BR:
cimi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
108308926 (BARD1)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
108308926 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
ANK_LRRK2
zf-C3HC4
Ank_KRIT1
zf-C3HC4_2
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
108308926
NCBI-ProteinID:
XP_017390471
Ensembl:
ENSCCAG00000021151
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MPENWKWRNRQPTVRSGNEPCSAPAMDPARGGAWAHSRAALHRLEKLLRCSRCTNILREP
VCLGGCEHIFCSNCVSDCIGTECPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKL
SDLKEDKPRTRLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPEIKKDVNAQQDSL
YEFVSTTPPADVSEKAKKPSARSLKKQKKKTLAEINQKWNLQAEKEDGKFDSKEESKQKL
VSFCSQPSVITSPEINGEIDLLASGSLTESECFGSLTEVSLPLAEQIDSPDTNSRNEVVT
PEKVCKDYLTCKKSLPLENNGKRGQDNRLSIPVSKRCRSSNLNTSGDFVKQMVPSENIPL
PQSSPDIKSKNEVVTPEKVCKNYLTSKKSLPLENNGKCGQHNRRSSPISKRCRSSILSTS
GDFVKQMVPSENIPLPESSSPPSRKRKVHGTSGRKNSNMSDEFISLSPGTPPSTLNSSRY
RQVTSSPSAMKLLPNMAVKRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTP
LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHMDIVKLLLSCGASRNAVN
IFGLRPVDYTDDEDMKSLLLLPEKNESSSTSHCSVMKTGQRKDGPLVLIGSGLSSEQQKM
LSELAVILKAKKCTEFESTVTHVVVPGDEVQSTLKCMLGILNGCWILKFEWVKACLQRKV
CEQEEKYEIPEGPQRSRLNREQLLPKLFDGCYFYLGGTFKHHPKDNLIKLVTAGGGQILS
RRPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYENLSNYHPERVRQGKVWMAPSSWFI
DCVMSFELLPLDS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaactggaagtggaggaaccggcagccgacggtccgctccgggaacgagcct
tgctctgcgcccgccatggatccggcccgtggcggggcgtgggcccacagtcgagccgcg
ctccaccgcctggagaagctgctgcgttgctcgcgttgcactaacattctgagagagcct
gtgtgcttaggagggtgtgagcacatcttctgtagtaattgtgtaagcgactgcattgga
actgaatgtccagtgtgttacaccccagcctggatacaagatgtgaagattaatagacaa
ctggacagcatgattcaactttgtagtaagcttcgaaatttgctacatgacaataagctc
tcagatttgaaagaagataaacctaggacaaggttgtttaatgatgcagaaaacaagaag
aattcaattaaaatgtggtttagccctcgaagtaagaaagtcagatatgttgtgagtaaa
gtttcagtgcagacccaacctgaaataaaaaaagatgtaaatgctcagcaagactcactg
tatgaatttgtttccacaactcctcctgcagatgtttctgagaaggctaaaaagccttct
gcaagatctctaaaaaagcaaaaaaagaaaactttagctgaaatcaaccaaaaatggaat
ttacaggcagaaaaagaagatggcaaatttgactccaaagaggaatcgaagcaaaagctg
gtatccttctgtagccaaccatccgttatcaccagccctgagataaatggtgaaatagac
ttactagcaagtggctccttgacagaatctgaatgttttggaagtctaactgaagtctct
ttaccgttggctgagcaaatagactctccagacactaacagcaggaatgaagtagtgact
cctgaaaaggtctgcaaagattatcttacatgtaagaaatctttgccattagaaaataat
ggaaaacgtggtcaagacaatagactttccattcccgtttctaagagatgtagaagcagc
aatctgaacaccagtggagattttgttaagcaaatggtgccctcagaaaatattccattg
cctcaaagttctccagacattaagagcaagaatgaagtagtgactcctgagaaggtctgc
aaaaattatcttacatctaagaaatctttgccattagaaaataatggaaaatgtggccaa
cataatagacgttccagtcccatttctaagagatgtagaagcagcattctgagcaccagt
ggagattttgttaagcaaatggtgccctcagaaaatattccattacctgaaagttcttcg
ccaccttcacgcaaacgtaaagttcatggtacatcggggaggaaaaacagtaatatgtca
gatgaattcattagtctttcaccaggtacaccaccttctacattaaatagttcaaggtac
agacaagtgacatctagcccctcagcaatgaagctgttacccaatatggctgtgaaaaga
aatcatagaggagagactttgctccatattgcttctattaagggcgacataccttctgtt
gaataccttttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacacca
ttgcatgaagcttgcaatcatgggcacctgaaggtagtggaattattgctccagcataag
gcattggtgaacaccactgggtatcaaaatgactcaccacttcacgatgcagccaagaat
gggcacatggatatagtcaagctgttactttcctgtggagcctccaggaatgctgttaac
atatttggtctgcggcctgtggattatacagatgatgaagatatgaagtcactattgctg
cttccagagaagaatgaatcatcctcaaccagccattgctcggtaatgaagactgggcag
cgtaaggatggacctcttgtacttataggcagtgggctttcttcagaacaacagaaaatg
ctcagtgagcttgcagtaattcttaaggctaaaaaatgtactgagtttgagagtacagta
actcatgttgttgttcctggtgatgaagttcaaagtaccttgaagtgtatgcttgggatt
ctcaatggatgctggattctaaaattcgaatgggtaaaagcatgtctacaaagaaaagta
tgtgaacaggaagaaaagtacgaaattcctgaaggtccacagagaagcaggctcaacaga
gaacagctgttgccaaagctgtttgatggatgctacttctatttggggggaaccttcaaa
caccatccaaaggacaaccttattaagctcgtcactgcaggtgggggccagatcctcagt
agaaggcccaagccagacagtgacgtgactcagaccataaatacagtcgcataccatgcc
agacctgattctgatcagcgcttctgcacccaatatatcatttatgagaatttgtctaat
tatcacccagagagggttcgtcagggcaaagtgtggatggctccttcgagctggtttata
gactgtgtgatgtcctttgagttgcttcctcttgacagctga
DBGET
integrated database retrieval system
