Cebus imitator (Panamanian white-faced capuchin): 108312134
Help
Entry
108312134 CDS
T08783
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi04360
Axon guidance
cimi04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108312134 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
108312134 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cimi04515
]
108312134 (ROBO1)
Cell adhesion molecules [BR:
cimi04515
]
Immunoglobulin superfamily
ROBO family
108312134 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
108312134
NCBI-ProteinID:
XP_017395397
Ensembl:
ENSCCAG00000009443
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MKWKHAPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDEPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIKKVMAADMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKP
RDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCV
ATGSPVPTILWRKDGVLISTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGAS
HGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSA
PPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSV
VIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIA
NYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNLSNNMNNGSGDSGEKHWKPLGQQKQEVAPVQYNIMEQNKLNKDYRANDTIPPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHS
NSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQC
PRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPS
KTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGREVLDGRQVVDLRTNPGDPREAQEQQ
NDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQR
EQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatgctccttttttggtcataatatcactcctcagcttatccccaaat
cacctgcttctggcccagcttatcccagaccctgaagatctagagagggggaacgaccac
gggacgccgatccccacctctgataacgatgacaattcgctgggctatacaggctcccgt
cttcgtcaggaagattttccacctcgcattgttgagcacccttcagacctgattgtctca
aaaggagaacctgcaactttgaactgcaaagctgaaggccgccccacacccactattgaa
tggtacaaagggggagagagagtagagacagacaaagatgagcctcgctcacaccgaatg
ttgctgccaagtggatctttatttttcttacgtatagtacatggaagaaaaagtagacct
gatgagggagtctatgtctgcgtagcaaggaattaccttggagaggctgtgagccacaat
gcatcgctggaagtagccatacttcgggacgacttcagacaaaacccttcggatgtcatg
gttgcagtaggagagcctgcagtcatggaatgccagcctccacgaggccatcctgagccc
acgatttcatggaagaaagatggctctccactggatgataaagatgaaagaataactata
cgaggaggaaagctcatgatcacttacacccgtaaaagtgacgctggcaaatatgtttgt
gttggcaccaatatggttggggaacgtgagagtgaagtagcagaactaactgttttagag
agaccatcatttgtgaagagacccagtaacttggcggtaactgtggatgacagtgcagaa
tttaaatgtgaggcccgaggtgacccagtgcctacagtacggtggaggaaagatgatgga
gagctgcccaagtccagatatgaaatccgagatgatcataccttgaaaattaagaaggta
atggctgccgacatgggttcctacacttgtgttgcagaaaatatggttggaaaagctgaa
gcatctgctactctgactgttcaagttgggtctgaacctccacattttgttgtgaaaccc
cgtgaccaggttgttgccttgggacggacagtaacttttcaatgtgaagcaaccggaaat
cctcagccagctatattttggaggagagaggggagtcagaatctgcttttctcgtatcaa
ccaccacagtcatccagccggttttcagtctcccagactggtgacctcacaattactaat
gtccagcgatctgatgttggttattacatttgccagactttaaatgttgctggaagcatc
atcacaaaggcatatttggaagttacagatgtgattgcagatcggcctcccccggttatt
cgacaaggtcctgtgaatcagactgtagctgtggatggcactttcgtcctcagctgtgtg
gccacaggcagtccagtgcccacaattctgtggagaaaggatggagtcctcatttcaacc
caagattctcgaatcaaacagttggagaatggagtgctgcagatccgatatgctaagctg
ggtgatactggtcggtacacctgcattgcatcaactcccagtggtgaagcaacatggagt
gcttacattgaagtccaagaatttggagttcctgttcagcctccaagacccactgatcca
aatttaattcctagtgctccatcaaaacctgaagttacagatgtcagcagaaatacagta
acattatcatggcaaccaaatttgaattcaggagcaactccaacatcttatattatagaa
gccttcagccacgcatctggcagcagctggcagaccgtagcagagaatgtgaaaacagaa
acatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggcagct
aatgcatatggaattagtgatccaagccaaatatcagacccagtgaaaacacaagatgtt
ccaccaacaagtcagggtgtggaccacaagcaggtccagagagaactgggaaatgttgtc
ctgcacctccacaaccccaccatcctttcttcctcttccatcgaagtgcactggacagtg
gatcaacagtctcagtatattcaaggatataaaattctctatcggccatctggagccagc
cacggagaatcagagtggttagtttttgaagtgaggaccccaaccaaaaatagcgtggtt
atccctgatctcaaaaagggagtcaactatgaaattaaggctcgccctttttttaatgaa
tttcaaggagcagatagtgaaatcaagtttgccaaaaccctagaagaagcacccagtgcc
ccaccccaaggtgtaactgtatcaaagaatgatggaaatggaactgcaattcttgttagt
tggcagccacctccggaagacactcagaatggaatggtccaagagtacaaggtttggtgt
ctgggcaatgaaactcgataccacataaacaaaacagtggatggttccaccttttctgtg
gtcattccctttcttgttcctggaatccgatacagtgtggaagtggcagccagcactggg
gctgggcctggggtgaagagtgagcctcagttcatccagttagattcccatggaaaccct
gtgtcacctgaggaccaagtcagcctcgcccagcagatctcagatgtggtgaagcagcct
gccttcattgcaggaatcggagcagcctgttggatcatcctcatgctcttcagcgtctgg
ctctatcgacaccgcaagaagaggaacggacttactagtacttacgcgggtatcagaaaa
gtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggcgaagctgtcagc
agtggagggaggccaggacttctcaacatcagtgaacctaccacacagccctggctggca
gacacgtggcctaacactggcaacaatcacaatgactgctccatcagctgctgtgcggca
ggcaatgggaacagcgacagcaacctcactacctacagccgcccagctgattgtatagca
aattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtt
tatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaat
ctgaaggatgggcgttttgtcaatccatcagggcagcctactccttacgccaccactcag
ctcatccagtcaaacctcagcaacaacatgaacaacggcagcggggactctggcgagaag
cactggaaaccactgggacagcagaaacaagaagtggcaccagttcagtacaacatcatg
gagcaaaacaagctgaacaaagattatcgagcaaatgacacaattcctccaactatccca
tacaaccaatcatatgaccagaacacaggaggctcctacaacagttcggaccggggcagc
agtacatctgggagtcaagggcataagaaaggggcaagaacacccaaagtaccaaaacaa
ggtggcatgaactgggctgacctgcttcctcctcccccagcacatcctcctccgcacagc
aatagcgaagagtacaacatttctgtagacgaaagctatgaccaggaaatgccatgtcct
gtgccaccagcaaggatgtatttgcaacaagatgaattagaagaggaggaagatgaacga
ggccccactccccctgttcggggagcagcttcttctccagctgccgtgtcctatagccat
caatccactgccactctgactccttccccacaggaagaacttcagcccatgttacaggat
tgtccagaggagattggccacatgcagcaccaacccgacaggagacggcagcctgtgagt
cctcctccaccaccacggccgatttcccctccacatacctatggctacatttcaggaccc
ctggtctcagatatggatacggatgcaccagaagaggaagaagatgaagccgacatggaa
gtagccaagatgcaaaccagaaggcttttgttacgtgggcttgagcagacacctgcctcc
agtgttggggacctggagagctctgtcacggggtccatgattaacggctggggctcagcc
tcagaggaggacaacatttccagtggacgctccagcgttagttcttcggatggctccttt
ttcactgatgctgattttgcccaagcagtcgcagcagcagcagagtatgccggtctgaaa
gtggcgcgaaggcaaatgcaggatgctgctggccgacgacattttcatgcatctcagtgc
cctaggcccacaagtcctgtgtctacagacagcaacatgagtgccgctgtaatgcagaaa
accagaccagccaagaaacaaaaacaccagccaggacatctgcgcagagaagcctacaca
gatgatcttccacctcctcctgtgccaccacctgctataaagtcacccactgtcccatcc
aagacacagctggaagtacgacctgtagtagtgccaaaactcccttctatagatgcaaga
acagacagatcgtcagatagaaaaggaagcaattacaaggggagagaagtattggatgga
agacaagttgttgacctgcgaacaaatccaggtgatcccagagaagcacaggaacaacaa
aatgacgggaaaggacgtggaaacaaggcagcgaaacgagaccttccaccagcaaagact
catctcatccaagaggatattctaccttattgtagacctacttttccaacgtcaaataat
cccagagatcccagctcttcaagctcaatgtcatcaagaggatcaggaagccgacaaaga
gaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaggtacttggaggatatgaa
agaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system
